Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_E09
         (908 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U93239-1|AAB51391.1|  399|Homo sapiens Sec62 protein.                  49   2e-05
D87127-1|BAA13254.1|  399|Homo sapiens translocation protein-1 p...    49   2e-05
BC012035-1|AAH12035.1|  399|Homo sapiens TLOC1 protein protein.        49   2e-05
BC003677-1|AAH03677.1|  169|Homo sapiens Unknown (protein for IM...    49   2e-05
AB024586-1|BAB12685.1|  399|Homo sapiens translocation protein 1...    49   2e-05

>U93239-1|AAB51391.1|  399|Homo sapiens Sec62 protein.
          Length = 399

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 21/38 (55%), Positives = 27/38 (71%)
 Frame = +1

Query: 235 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALVDFK 348
           AVAK+L+ N PTK T  + H V+YF  +KAVD L+D K
Sbjct: 23  AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSK 60


>D87127-1|BAA13254.1|  399|Homo sapiens translocation protein-1
           protein.
          Length = 399

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 21/38 (55%), Positives = 27/38 (71%)
 Frame = +1

Query: 235 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALVDFK 348
           AVAK+L+ N PTK T  + H V+YF  +KAVD L+D K
Sbjct: 23  AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSK 60


>BC012035-1|AAH12035.1|  399|Homo sapiens TLOC1 protein protein.
          Length = 399

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 21/38 (55%), Positives = 27/38 (71%)
 Frame = +1

Query: 235 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALVDFK 348
           AVAK+L+ N PTK T  + H V+YF  +KAVD L+D K
Sbjct: 23  AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSK 60


>BC003677-1|AAH03677.1|  169|Homo sapiens Unknown (protein for
           IMAGE:3932691) protein.
          Length = 169

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 21/38 (55%), Positives = 27/38 (71%)
 Frame = +1

Query: 235 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALVDFK 348
           AVAK+L+ N PTK T  + H V+YF  +KAVD L+D K
Sbjct: 23  AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSK 60


>AB024586-1|BAB12685.1|  399|Homo sapiens translocation protein 1
           protein.
          Length = 399

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 21/38 (55%), Positives = 27/38 (71%)
 Frame = +1

Query: 235 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALVDFK 348
           AVAK+L+ N PTK T  + H V+YF  +KAVD L+D K
Sbjct: 23  AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSK 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,562,790
Number of Sequences: 237096
Number of extensions: 1592730
Number of successful extensions: 2425
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2415
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)