Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_E05
         (1165 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    30   5.3  
AY071500-1|AAL49122.1|  514|Drosophila melanogaster RE55842p pro...    29   9.2  
AE014297-1038|AAF54448.2|  514|Drosophila melanogaster CG12946-P...    29   9.2  
AE014297-1037|ABI31156.1|  630|Drosophila melanogaster CG12946-P...    29   9.2  

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
            protein.
          Length = 926

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 28/109 (25%), Positives = 34/109 (31%), Gaps = 5/109 (4%)
 Frame = +1

Query: 769  PPASXXTSIHPXXPQXPPXTPTAYXDTXXXXPNXX*PSVEXXTXXCXP--XXXTNMSRXP 942
            PP +  T+     P  PP  P  Y  T         P+    T    P     T +   P
Sbjct: 444  PPVTVRTTRATPPPTRPPTRPPTYPPTTRRLTTPA-PTYLPPTNKPLPPVTVRTTVRTTP 502

Query: 943  TPXTXP-XPXKRKXTXYXQXPXXVAXXPPTQXXRAXNSHPS--XPPPTL 1080
             P   P  P  R  T Y   P      PP    R     P+   PP T+
Sbjct: 503  RPTLPPTKPPTRPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTV 551



 Score = 30.3 bits (65), Expect = 5.3
 Identities = 28/109 (25%), Positives = 34/109 (31%), Gaps = 5/109 (4%)
 Frame = +1

Query: 769  PPASXXTSIHPXXPQXPPXTPTAYXDTXXXXPNXX*PSVEXXTXXCXP--XXXTNMSRXP 942
            PP +  T+     P  PP  P  Y  T         P+    T    P     T +   P
Sbjct: 655  PPVTVRTTRATPPPTRPPTRPPTYPPTTRRLTTPA-PTYLPPTNKPLPPVTVRTTVRTTP 713

Query: 943  TPXTXP-XPXKRKXTXYXQXPXXVAXXPPTQXXRAXNSHPS--XPPPTL 1080
             P   P  P  R  T Y   P      PP    R     P+   PP T+
Sbjct: 714  RPTLPPTKPPTRPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTV 762


>AY071500-1|AAL49122.1|  514|Drosophila melanogaster RE55842p
           protein.
          Length = 514

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +1

Query: 655 AXPXXXAXXSXSHNSXTPTXTSAQXAXTDHLXFRAXPPPPASXXTSIHPXXPQXPPXTPT 834
           A P   A  +   ++   T  SAQ            PPPP +    + P  P  P   P 
Sbjct: 336 APPAAPAKPTSRSSAVYMTPLSAQKTQISSTPVPVSPPPPTAASVGVPPPPPAPPAGVPP 395

Query: 835 A 837
           A
Sbjct: 396 A 396


>AE014297-1038|AAF54448.2|  514|Drosophila melanogaster CG12946-PA,
           isoform A protein.
          Length = 514

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +1

Query: 655 AXPXXXAXXSXSHNSXTPTXTSAQXAXTDHLXFRAXPPPPASXXTSIHPXXPQXPPXTPT 834
           A P   A  +   ++   T  SAQ            PPPP +    + P  P  P   P 
Sbjct: 336 APPAAPAKPTSRSSAVYMTPLSAQKTQISSTPVPVSPPPPTAASVGVPPPPPAPPAGVPP 395

Query: 835 A 837
           A
Sbjct: 396 A 396


>AE014297-1037|ABI31156.1|  630|Drosophila melanogaster CG12946-PB,
           isoform B protein.
          Length = 630

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +1

Query: 655 AXPXXXAXXSXSHNSXTPTXTSAQXAXTDHLXFRAXPPPPASXXTSIHPXXPQXPPXTPT 834
           A P   A  +   ++   T  SAQ            PPPP +    + P  P  P   P 
Sbjct: 452 APPAAPAKPTSRSSAVYMTPLSAQKTQISSTPVPVSPPPPTAASVGVPPPPPAPPAGVPP 511

Query: 835 A 837
           A
Sbjct: 512 A 512


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,212,518
Number of Sequences: 53049
Number of extensions: 403533
Number of successful extensions: 1440
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6148272354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)