Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_E04
(877 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 33 0.30
05_01_0362 - 2832100-2832123,2832566-2832596,2832805-2833541,283... 31 1.6
03_05_0292 + 22846273-22846377,22847161-22847823 31 1.6
09_04_0197 - 15522167-15523524,15525416-15525683 30 2.1
03_02_0801 + 11343227-11343885,11344018-11344087,11344362-113444... 30 2.8
09_06_0095 + 20833313-20835073 29 3.7
08_02_1210 + 25314569-25314596,25315271-25315455,25315539-253156... 29 3.7
01_06_0735 - 31579201-31579208,31579402-31579467,31580222-315803... 29 4.9
01_06_0597 - 30505800-30506021,30506135-30506566,30506673-30506819 29 4.9
06_01_0424 + 3041296-3041860,3042701-3042786,3042858-3043147,304... 29 6.5
05_05_0050 + 21916020-21916489,21916906-21917380,21917472-21918278 29 6.5
03_05_1160 + 30826972-30828375,30828641-30828754,30828901-308290... 29 6.5
03_05_0761 - 27515441-27515650,27515967-27516074,27516666-275168... 29 6.5
03_02_0530 + 9236323-9236346,9236933-9237185,9237872-9238119,923... 29 6.5
02_05_1081 + 33971950-33972606 29 6.5
01_07_0260 - 42364769-42364777,42364884-42365354 29 6.5
07_03_1257 - 25241194-25242018 28 8.5
05_07_0195 - 28331445-28331641,28331841-28331934,28332019-283320... 28 8.5
05_01_0570 + 5061600-5062142,5062790-5062972 28 8.5
03_06_0711 - 35682293-35682952 28 8.5
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 33.1 bits (72), Expect = 0.30
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +1
Query: 529 RESTGGRN*GREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAR 708
R+ST GR+ G DG + A A H G+ AAR + + R G A P R
Sbjct: 28 RQSTRGRSTGSGDGEESEALAAAVHAGKISREDAAARRMARTKQTARKSTGGKAPRKPLR 87
Query: 709 EVERGAPSRPEAHG 750
+ P+ P + G
Sbjct: 88 AIAAVMPA-PSSRG 100
>05_01_0362 -
2832100-2832123,2832566-2832596,2832805-2833541,
2834333-2834825,2835762-2835770,2838062-2838561
Length = 597
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +2
Query: 125 CRAWLCVQVRANRQRAQH*SHGAPPPXVATHDQKTFARPVRGEPGKVRLGFIPEEW 292
C +WL + R+ R+ A + A P A V+G+P G +P W
Sbjct: 45 CSSWLRAERRSRRRLAVANCYAAAPRDAVERFPSVRAAEVKGKPHFADFGLVPPAW 100
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = +1
Query: 541 GGRN*GREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVER 720
GGR G DG AR G G G G R R H GEAA+G AR +
Sbjct: 60 GGRGDGARDGGGARGGGGRGARGGGGARGGGGR-----------HGGEAATGAEARRL-- 106
Query: 721 GAPSRPEAHGSTGIVSNVTKAI 786
P+ G+ +++ V +
Sbjct: 107 -----PDVRGAAAVLAEVAALV 123
>09_04_0197 - 15522167-15523524,15525416-15525683
Length = 541
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 471 GWTRKLKRPRTNGTKVGTKP 530
G++++L RPR+NGT + TKP
Sbjct: 416 GFSQRLTRPRSNGTYLSTKP 435
>03_02_0801 +
11343227-11343885,11344018-11344087,11344362-11344433,
11344511-11344980,11345626-11346598
Length = 747
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -3
Query: 482 PCPTKRPTLVRISRELHTP*PTVTVRSNIRAPLH 381
PCPT VR+S + P PTV V S + AP H
Sbjct: 146 PCPT-----VRVSSAVGAPCPTVRVSSAVGAPCH 174
>09_06_0095 + 20833313-20835073
Length = 586
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 590 QELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLEKSNVERRLAQKHM 748
+EL +QA+KE +EAA + A +++ R Q K + +R +HM
Sbjct: 324 RELKVQARKEAEKFWIEAAATAKKAQALQDLEERYKQQFIKPSYDREDISEHM 376
>08_02_1210 +
25314569-25314596,25315271-25315455,25315539-25315648,
25315756-25315909,25316213-25316237,25316566-25316756,
25316837-25316899,25317012-25317075,25318078-25318109
Length = 283
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 455 PKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQ 634
P L + +D+E+ E + G + K DAI EK +EL I K+ VLL+
Sbjct: 37 PNLHSNVDREIRQIEQQAYTGVLRAFKVQSDAITWEKESLITELRKELQISDKEHRVLLK 96
>01_06_0735 -
31579201-31579208,31579402-31579467,31580222-31580307,
31580396-31580430,31580586-31580669,31580754-31580843,
31581267-31581304,31582042-31582108
Length = 157
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +2
Query: 497 ENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYT 676
E E E + ++ E+ E E + + +G E LIQ + N++ +E + T
Sbjct: 39 EEEKEEEEDDIEESEEEESEDESEGKAKHKGTEGLIQIENPNLVKAKNIKAKEVDLGKTT 98
Query: 677 EVKRRLDYQLEKSNVERR 730
E+ RR ++EK R
Sbjct: 99 ELSRREREEIEKQKAHER 116
>01_06_0597 - 30505800-30506021,30506135-30506566,30506673-30506819
Length = 266
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 506 WNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERL 661
W G T A+ E E+T++W A E +Q + ++E +Y+ +L
Sbjct: 28 WRHGAPPTYDAVNSLFEAERTQEWPAGSLEETVQNAIKT--WEMELSYKAKL 77
>06_01_0424 +
3041296-3041860,3042701-3042786,3042858-3043147,
3043225-3043285,3043773-3043868,3044448-3044603,
3044811-3044987
Length = 476
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 479 KEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLE-AAYRE 655
+E+E + NEG N+ K ++ EK + + E L A + N L+ E + RE
Sbjct: 337 REIECLHKQLNEGENKASKERSRRMKSEKLVKTLSSQVEQLRSANERNANLERELSECRE 396
Query: 656 R 658
R
Sbjct: 397 R 397
>05_05_0050 + 21916020-21916489,21916906-21917380,21917472-21918278
Length = 583
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/56 (23%), Positives = 22/56 (39%)
Frame = +2
Query: 125 CRAWLCVQVRANRQRAQH*SHGAPPPXVATHDQKTFARPVRGEPGKVRLGFIPEEW 292
CR W + + + A P + + + V+G+P G IPE+W
Sbjct: 34 CRRWHRIDALTRKHVTVPFCYAASPAHLLARFPRLESLAVKGKPRAAMYGLIPEDW 89
>03_05_1160 +
30826972-30828375,30828641-30828754,30828901-30829032,
30830087-30830224
Length = 595
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +2
Query: 545 DAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDYQLE---KS 715
D + + E+W ++ ++L IQA++ L + + A RL+ K+RL+ E K+
Sbjct: 448 DEYKRAQEEEWASRQRQLRIQAEEAQRLRKRKKAEAMRLLDMEKRQKQRLEEVRESQRKN 507
Query: 716 NVERRLAQKHMG 751
+ +L +K+ G
Sbjct: 508 EADIQLKEKYRG 519
>03_05_0761 -
27515441-27515650,27515967-27516074,27516666-27516839,
27517185-27517469,27517688-27517920,27519422-27520139
Length = 575
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3
Query: 608 PG*GAPVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPC 477
PG AP PA P P PP ++ G++LR +L LPC
Sbjct: 111 PG-AAPPPAVGGGPDPSPPRCPPFVALSGAELRG-AGDALALPC 152
>03_02_0530 +
9236323-9236346,9236933-9237185,9237872-9238119,
9239565-9239972
Length = 310
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 568 GAVARAGTGAPHPG-QEGERAPAARGRLQGEAHVRLHRGEAASG 696
G R T A + +E P RGR +GE HV HRG+ G
Sbjct: 257 GEAHRGYTSAQYDNFRERPDYPEFRGRGRGEGHVLEHRGQFPGG 300
>02_05_1081 + 33971950-33972606
Length = 218
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = -3
Query: 569 PSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPT--KRPTLVRISRELHTP*PTVTVRSNI 396
P S P P D R+ R ++ PT K P R ++ HT ++S
Sbjct: 112 PVSSPSPAPVAAQAAAVDQRAPRVPAVAQAAPTDQKAPRPARSKQQQHTAAVPTKIKSVA 171
Query: 395 RAPLHRFPCCTGMLPDP 345
AP++ P + P+P
Sbjct: 172 DAPVYAGPAFSSASPEP 188
>01_07_0260 - 42364769-42364777,42364884-42365354
Length = 159
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 571 AVARAGTGAPHPGQEGERAPAA 636
A+A G GA G+EGE+ PAA
Sbjct: 132 AIAGCGAGAVDAGEEGEKRPAA 153
>07_03_1257 - 25241194-25242018
Length = 274
Score = 28.3 bits (60), Expect = 8.5
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = -3
Query: 596 APVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCP-------TKRPTLVRISRE 438
A PA + +PSS P L+P S +++R RSLQ P P T P + SR
Sbjct: 15 AECPATSPSPSSPPPLQPRPRSPRPMP-QAVRHRSLQPPAPDVAGRDSTPSPASMTPSRC 73
Query: 437 LHTP*PTVTVRSNIRAPLHRFP 372
T T T R LH P
Sbjct: 74 RTTLASTTTTRRRPPRRLHSRP 95
>05_07_0195 -
28331445-28331641,28331841-28331934,28332019-28332099,
28332186-28332234,28332334-28332419,28332513-28332740,
28332819-28332857,28332958-28333047,28333207-28333269,
28333371-28333449,28333539-28333585,28333668-28333730,
28333814-28333864,28333977-28334060,28334162-28334226,
28334559-28334676,28334775-28334825,28335228-28335314,
28335633-28335712,28336676-28336793
Length = 589
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 343 CGSGNIPVQQGNLCNGARILLRTVTVGH 426
CG + PV++GN CNGA + GH
Sbjct: 542 CGVVSSPVRRGNYCNGATKQQKLYQNGH 569
>05_01_0570 + 5061600-5062142,5062790-5062972
Length = 241
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/69 (28%), Positives = 25/69 (36%)
Frame = +1
Query: 556 GREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLHRGEAASGLPAREVERGAPSR 735
G ED AV G P R R + + + RG+ G R V A R
Sbjct: 117 GEEDSAVE--WNGGPTRVHGSARPRQRRRATRARSRLSAGRGDGVGGARGRAVRGSARRR 174
Query: 736 PEAHGSTGI 762
P +TGI
Sbjct: 175 PRKEETTGI 183
>03_06_0711 - 35682293-35682952
Length = 219
Score = 28.3 bits (60), Expect = 8.5
Identities = 25/84 (29%), Positives = 35/84 (41%)
Frame = -3
Query: 596 APVPARATAPSSLPQLRPPVLSRFGSDLRSIRSRSLQLPCPTKRPTLVRISRELHTP*PT 417
AP+ A A +P SLP P S +D R + L P++ P+ S +P P
Sbjct: 19 APLLASAESPISLPPASAPTASTPAADER-LHPADAAL-APSQPPSEASSSAAALSP-PA 75
Query: 416 VTVRSNIRAPLHRFPCCTGMLPDP 345
S + AP H P P+P
Sbjct: 76 PPETSPLPAPSHSPPVPHSAAPEP 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,374,291
Number of Sequences: 37544
Number of extensions: 502245
Number of successful extensions: 2018
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2018
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -