Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_E03
(1323 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1125 + 31085106-31085714 31 0.20
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 33 0.67
11_06_0610 - 25449085-25453284 32 0.88
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155... 30 3.6
08_02_0450 - 17266977-17267165,17268017-17268053,17268139-172695... 30 3.6
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 30 3.6
08_01_0059 - 394001-394708 29 6.2
04_01_0034 - 401208-402923 29 6.2
>04_04_1125 + 31085106-31085714
Length = 202
Score = 31.5 bits (68), Expect(2) = 0.20
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +2
Query: 557 PXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
P P P PP P PP +PP + P TP
Sbjct: 39 PPPPPCQPPPPTPTPATPTTPPTPWTPPPATPTPPTP 75
Score = 21.8 bits (44), Expect(2) = 0.20
Identities = 10/33 (30%), Positives = 12/33 (36%)
Frame = +2
Query: 782 TXSXPPHXPWXGXALAXXXRRAXPAXHXXPPSP 880
T + P PW A PA PP+P
Sbjct: 69 TPTPPTPTPWTPTPATPPPTPATPATPTTPPTP 101
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 32.7 bits (71), Expect = 0.67
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
PP Q P P TPP P PP PP S P P
Sbjct: 1154 PPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQP 1196
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 32.3 bits (70), Expect = 0.88
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
PP + P P P PP + P P PP +S P P
Sbjct: 1147 PPEKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAP 1189
Score = 32.3 bits (70), Expect = 0.88
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
PP + P P P PP + P P PP +S P P
Sbjct: 1211 PPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPEKSPPPAAP 1253
Score = 31.1 bits (67), Expect = 2.0
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +2
Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
PP + P P PP ++ P P P +S P TP
Sbjct: 1058 PPTKSSPPQVPVTSEPPPAKSSPPHEPISPPETPEKSYPPSTP 1100
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
PP + P P P PP + P P PP +S P P
Sbjct: 1163 PPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAP 1205
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
PP + P P P PP + P P PP +S P P
Sbjct: 1179 PPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKSPPPPAP 1221
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
PP + P P P PP + P P PP +S P P
Sbjct: 1195 PPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAP 1237
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +2
Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
PP + P P PP ++ P+ P PP +S P P
Sbjct: 1042 PPVKSSPPHAPVISEPPPTKSSPPQVPVTSEPPPAKSSPPHEP 1084
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +2
Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
PP + P P +PP + P P PP +S P P
Sbjct: 1243 PPEKSPPPAAPVILSPPAVKSLPPPAPVSLPPPPVKSLPPPAP 1285
Score = 29.1 bits (62), Expect = 8.2
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +2
Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
PP + P P P PP + P P P +S P P
Sbjct: 1227 PPVKSPPPPAPVISPPPPEKSPPPAAPVILSPPAVKSLPPPAP 1269
>09_04_0487 -
18014469-18014660,18014935-18015016,18015297-18015548,
18015634-18017789
Length = 893
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 515 ILSHXHQHPPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
+L+ P + P P P PP R P PP SPPR+ P +P
Sbjct: 462 VLAAGSSTPSSAAAPAP-PSPPEPPSPR--HPPSPPPLRSPPRQPTPPPSP 509
>08_02_0450 -
17266977-17267165,17268017-17268053,17268139-17269514,
17285369-17286055,17286146-17286343
Length = 828
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +2
Query: 515 ILSHXHQHPPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
+L+ P + P P P PP R P PP SPPR+ P +P
Sbjct: 508 VLAAGSSTPSSAAAPAP-PSPPEPPSPR--HPPSPPPLRSPPRQPTPPPSP 555
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +2
Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSP-PRRSXXPXTP 667
PP + P P P PP + P PP P P R P P
Sbjct: 577 PPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRPPPPAMP 620
>08_01_0059 - 394001-394708
Length = 235
Score = 29.5 bits (63), Expect = 6.2
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 557 PXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
P P PP + PR P SPP R P TP
Sbjct: 4 PPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTP 40
>04_01_0034 - 401208-402923
Length = 571
Score = 29.5 bits (63), Expect = 6.2
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +2
Query: 542 PNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXP 658
P Q P P P ++ RP PP PP R+ P
Sbjct: 300 PLQPRPAPPPPPPQQQRAKPSRPPPPPPPLDPPPRAAAP 338
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,081,841
Number of Sequences: 37544
Number of extensions: 183266
Number of successful extensions: 1373
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4143716112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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