Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_E03
         (1323 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ...    34   1.0  
AK025429-1|BAB15128.1|  274|Homo sapiens protein ( Homo sapiens ...    34   1.3  
AF279145-1|AAK52094.1|  564|Homo sapiens tumor endothelial marke...    34   1.3  
AC112230-1|AAX88860.1|  329|Homo sapiens unknown protein.              34   1.3  
BC050397-1|AAH50397.1|  489|Homo sapiens MARCH9 protein protein.       31   7.1  
BC050072-1|AAH50072.1|  489|Homo sapiens forkhead box G1 protein.      31   7.1  
AB051514-1|BAB21818.1| 1130|Homo sapiens KIAA1727 protein protein.     31   7.1  
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.     31   9.4  

>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
           protein.
          Length = 1362

 Score = 34.3 bits (75), Expect = 1.0
 Identities = 16/51 (31%), Positives = 17/51 (33%)
 Frame = +2

Query: 524 HXHQHPPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTPXXA 676
           H H H   Q  P P P    PP  +   P  P     PP     P  P  A
Sbjct: 739 HHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQA 789


>AK025429-1|BAB15128.1|  274|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21776 fis, clone HEP00171. ).
          Length = 274

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 15/43 (34%), Positives = 16/43 (37%)
 Frame = +2

Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
           PP    P P P   TPP         PP    PP R+  P  P
Sbjct: 226 PPAPHCPPPPPSAPTPPIPSPPSTLPPPPQAPPPNRAPPPSRP 268


>AF279145-1|AAK52094.1|  564|Homo sapiens tumor endothelial marker 8
           precursor protein.
          Length = 564

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 15/43 (34%), Positives = 16/43 (37%)
 Frame = +2

Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
           PP    P P P   TPP         PP    PP R+  P  P
Sbjct: 516 PPAPHCPPPPPSAPTPPIPSPPSTLPPPPQAPPPNRAPPPSRP 558


>AC112230-1|AAX88860.1|  329|Homo sapiens unknown protein.
          Length = 329

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 15/43 (34%), Positives = 16/43 (37%)
 Frame = +2

Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
           PP    P P P   TPP         PP    PP R+  P  P
Sbjct: 281 PPAPHCPPPPPSAPTPPIPSPPSTLPPPPQAPPPNRAPPPSRP 323


>BC050397-1|AAH50397.1|  489|Homo sapiens MARCH9 protein protein.
          Length = 489

 Score = 31.5 bits (68), Expect = 7.1
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
 Frame = +2

Query: 539 PPNQXXPXPXPXXXTPPXSRXXRPR--XPPXXXSPPRRSXXPXTP 667
           PP +  P P P    PP  +  RPR    P   S  R S  P TP
Sbjct: 62  PPPRPLPWPWPPTPPPPGRQPARPRKHRSPGGGSSERLSQAPKTP 106


>BC050072-1|AAH50072.1|  489|Homo sapiens forkhead box G1 protein.
          Length = 489

 Score = 31.5 bits (68), Expect = 7.1
 Identities = 13/45 (28%), Positives = 16/45 (35%)
 Frame = +2

Query: 524 HXHQHPPNQXXPXPXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXP 658
           H H H  +   P P      PP  +   P  PP    PP+    P
Sbjct: 47  HHHHHHHHHHHPPPPAPQPPPPPQQQQPPPPPPPAPQPPQTRGAP 91


>AB051514-1|BAB21818.1| 1130|Homo sapiens KIAA1727 protein protein.
          Length = 1130

 Score = 31.5 bits (68), Expect = 7.1
 Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
 Frame = +2

Query: 533 QHPPNQXXPXPXPXXXTPPXS--RXXRPRXPPXXXSPPRRSXXPXTP 667
           Q PP    P P P   +PP S  R   P  PP    PP     P  P
Sbjct: 15  QTPPPAPPPPPPPPPPSPPCSCSREECPSSPPPPPPPPLPGEPPIPP 61


>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
          Length = 1134

 Score = 31.1 bits (67), Expect = 9.4
 Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
 Frame = +2

Query: 518  LSHXHQHPPNQXXPX-PXPXXXTPPXSRXXRPRXPPXXXSPPRRSXXPXTP 667
            L   H  PP    P  P P   T P +R  R   PP    P RR   P  P
Sbjct: 989  LPRPHPPPPPPLPPLLPPPQTRTLPAARTMRQPPPPRLALPRRRRSPPRPP 1039


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,083,311
Number of Sequences: 237096
Number of extensions: 844499
Number of successful extensions: 4228
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3989
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 19156088040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)