Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_D22
(906 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 35 0.077
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 34 0.18
05_01_0142 - 940421-940701,941262-941574 33 0.24
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 33 0.31
03_03_0118 + 14597863-14597929,14598844-14599806,14599909-145999... 33 0.41
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.72
07_03_1136 + 24218601-24218734,24218769-24219906 31 0.95
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 31 1.7
07_01_0479 + 3606663-3607448 31 1.7
03_01_0164 - 1326002-1326409,1326410-1326428,1326523-1326647,132... 29 3.8
09_04_0618 + 18988614-18989102,18989913-18990314,18990555-189908... 29 5.1
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 29 5.1
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 28 8.9
08_02_1258 - 25670092-25670152,25671124-25671327,25671400-256716... 28 8.9
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 35.1 bits (77), Expect = 0.077
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 543 PPXGGGXPXFXPXGGP--APPXGGXIXXHXXPPQGGAPXXKNPPP 671
PP GG P P P PP H PPQG P PPP
Sbjct: 12 PPPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPP 56
Score = 23.4 bits (48), Expect(2) = 9.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 477 PXFLXKPXPPPP 442
P FL P PPPP
Sbjct: 49 PPFLAPPPPPPP 60
Score = 23.0 bits (47), Expect(2) = 9.7
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -1
Query: 453 PPPPPXXXFXEGPXXXPXG 397
PPPPP + P P G
Sbjct: 82 PPPPPQMYYQPPPPPPPYG 100
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.9 bits (74), Expect = 0.18
Identities = 23/57 (40%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = -3
Query: 679 PXXGGGFFXXGAPPXG-GXX*XXIXPPXGGAGP-PXGXKXGXPPPXGG-XXXFPPGG 518
P GG PP G G PP A P P G G PPP GG PPGG
Sbjct: 1176 PNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPPGG 1232
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 7/55 (12%)
Frame = -3
Query: 667 GGFFXXGAPPXG-GXX*XXIXPPXGGAG------PPXGXKXGXPPPXGGXXXFPP 524
GG APP G PP GG G PP G + G PPP PP
Sbjct: 1131 GGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPP 1185
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +3
Query: 489 PGKXAXGFXXPPGGKXXXPPXGGGXPXFXPXGGPAPPXGGXIXXHXXPPQGG 644
P A G PP GG P P G PAPP + PP GG
Sbjct: 1174 PPPNAHGGVAPPPPPPRGHGGVGGPPT--PPGAPAPPMPPGVPGGPPPPPGG 1223
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 33.5 bits (73), Expect = 0.24
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Frame = +3
Query: 474 GXXXXPGKXAXGFXXPPGGKXXXPPXGGGXPX---FXPXGGPAPPXGGXIXXHXXPPQGG 644
G G G+ PPG PP G P + P G PP G PP GG
Sbjct: 28 GYPPHQGYPPQGYPPPPGA--YPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPGGYPPPGG 85
Query: 645 APXXKNPPP 671
P PP
Sbjct: 86 YPQHGGYPP 94
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -3
Query: 649 GAPPXGGXX*XXIXPPXGGAGPPXGXKXGXPPPXGGXXXFPPGGXXKPXAXXPGXXXXP 473
G PP G PP G PP G PPP G PP G P P P
Sbjct: 28 GYPPHQGYPPQGYPPPPGAYPPPPG---AYPPPPGAYP--PPPGAYPPQHGYPQPGGYP 81
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 519 PPGGKXXXPPXGGGXPXFXPXGGPAPPXGGXIXXHXXPPQGGAPXXKNPPP 671
PP PP P P P PP GG PP P PPP
Sbjct: 273 PPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANGPPRSIPPP 323
>03_03_0118 +
14597863-14597929,14598844-14599806,14599909-14599936,
14600288-14600666
Length = 478
Score = 32.7 bits (71), Expect = 0.41
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -3
Query: 643 PPXGGXX*XXIXPPXGGAGPPXGXKXGXPPPXGGXXXFPPGGXXKP 506
PP G PP G PP G G PP GG P GG P
Sbjct: 380 PPVGTSPPTDFSPPAAGTTPPAG---GFTPPAGGFGTPPLGGFGTP 422
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.9 bits (69), Expect = 0.72
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 519 PPGGKXXXPPXGGGXPXFXPXGGPAPPXGGXIXXHXXPPQGGAPXXKNPPP 671
PP PP G P G P PP PP GG PPP
Sbjct: 331 PPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +3
Query: 519 PPGGKXXXPPXGGGXPXFXPXGGPAPPXGGXIXXHXXPPQGGAPXXKNPP 668
P PP P P GP PP PP+G +P PP
Sbjct: 321 PAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 519 PPGGKX-XXPPXGGGXPXFXPXGGPAPPXGGXIXXHXXPPQGGAPXXKNPPP 671
PP K PP G P P GP PP PP G PPP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.5 bits (68), Expect = 0.95
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +3
Query: 543 PPXGGGXPXFXPXGGPAPP-XGGXIXXHXXPPQGGAPXXKNPP 668
PP GGG P GG PP GG PP G PP
Sbjct: 91 PPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPP 133
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = -3
Query: 670 GGGFFXXGAPPXGGXX*XXIXPPXGGA-GPPXGXKXGXPPPXGGXXXFPPGG 518
GGG PP GG PP GG G G G GG P GG
Sbjct: 151 GGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGG 202
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 510 FXXPPGGKXXXPPXGGGXPXFXPXGGPAPPXGGXIXXHXXPPQGGAPXXKNPPP 671
F PP PP G P G + P GG + PP G P P P
Sbjct: 165 FGGPPVAAAQPPPFG--RPPSAAAAGQSAPLGGALFAAAQPPPFGGPPGAAPQP 216
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/70 (35%), Positives = 25/70 (35%), Gaps = 9/70 (12%)
Frame = +3
Query: 489 PGKXAXGFXXPPGGKXXX----PPXGG---GXPXFXPXGGPAPPXGGXIXXHXXPPQGGA 647
P A G P GG PP GG P P GG P GG P GGA
Sbjct: 182 PSAAAAGQSAPLGGALFAAAQPPPFGGPPGAAPQPAPTGGLRTPYGGPPAPSQQVPFGGA 241
Query: 648 P--XXKNPPP 671
P PPP
Sbjct: 242 PQWPGTQPPP 251
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 564 PXFXPXGGPAPPXGGXIXXHXXPPQGGAPXXKNPPP 671
P F P GG P I PP G P +PPP
Sbjct: 41 PPFAPPGGNGPVPSS-IRAPQAPPPGARPFPGSPPP 75
>07_01_0479 + 3606663-3607448
Length = 261
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -3
Query: 679 PXXGGGFFXXGAPPXGGXX*XXIXPPXGGAGPPXGXKXG-XPPPXGGXXXFPPGGXXKPX 503
P G F G PP G + P G GPP G + G PPP PP G +P
Sbjct: 201 PPPPPGPFMRGPPPMGPPQ---VRPGMPG-GPPPGMRPGMPPPPFRPGMPPPPPGPQQPG 256
Query: 502 AXXP 491
P
Sbjct: 257 QNPP 260
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = -3
Query: 598 GGAGPPXGXKXGXPPPXGGXXXFP--PGGXXKPXAXXPGXXXXPF 470
GG PP G PPP G P PGG P PG PF
Sbjct: 199 GGPPPPPGPFMRGPPPMGPPQVRPGMPGG--PPPGMRPGMPPPPF 241
>03_01_0164 -
1326002-1326409,1326410-1326428,1326523-1326647,
1327482-1327530,1328834-1328855,1328969-1329071
Length = 241
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 519 PPGGKXXXPPXGGGXPXFXPXGGPAPPXGGXIXXHXXPPQGGAP 650
PP P P P GG PP G PPQG P
Sbjct: 190 PPAPPAQGYPPAAYPPAGYPQGGAYPPPGSYPPPGSYPPQGSYP 233
>09_04_0618 +
18988614-18989102,18989913-18990314,18990555-18990806,
18991564-18991941,18992350-18992426,18992700-18992808,
18993424-18993574,18993810-18993903,18997072-18997474,
18997590-18997742,18998115-18998474
Length = 955
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +3
Query: 543 PPXGGGXPXFXPXGGPAPPXGGXIXXHXXPPQGGAPXXKNP 665
P GGG P + P GG APP P GG P P
Sbjct: 409 PHPGGGMPPY-PPGGNAPPHHPRQEPAPPHPTGGMPPYPMP 448
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +3
Query: 543 PPXGGGXPXFXPXGGPAPPXGGXIXXHXXPPQ-GGAPXXKNP 665
PP P F P G P PP PPQ GG P P
Sbjct: 69 PPMHSFAPSFRPLGAPPPPPPPQQVQVQVPPQYGGVPNPGYP 110
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +3
Query: 546 PXGGGXPXFXPXGGPAPPXG-GXIXXHXXPPQGGAPXXKNPPP 671
P G P P G PP G PPQG P PPP
Sbjct: 45 PQSGPYPYPPPSGAVYPPQGYPSSHGVYPPPQGPYPPPHQPPP 87
>08_02_1258 -
25670092-25670152,25671124-25671327,25671400-25671611,
25671701-25671749,25671833-25672612,25672696-25672767,
25672907-25672954,25673053-25673127,25673238-25673312,
25673614-25673668,25673931-25674016,25674759-25674988
Length = 648
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 555 GGXPXFXPXGGPAP--PXGGXIXXHXXPPQGGAPXXKNPPP 671
GG P F P GGP P P G + P AP PPP
Sbjct: 582 GGPPPFEPTGGPRPRRPGRGGLPMGGPSPILAAPL---PPP 619
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,773,591
Number of Sequences: 37544
Number of extensions: 453345
Number of successful extensions: 2812
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2480
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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