Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_D12
(1076 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 32 0.81
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 32 0.81
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 32 0.81
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 32 0.81
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 32 0.81
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 32 0.81
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 32 0.81
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.4
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 31 1.4
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 31 1.9
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 7.6
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 7.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 7.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 7.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 7.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 7.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 7.6
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 28 10.0
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 28 10.0
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 10.0
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 28 10.0
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 696 PSIATQTXPXPRXGPNXXPXPHP-PXHXPXPSPKTXXXP 809
P +A + P P P P P P P P P PK P
Sbjct: 32 PEVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEP 70
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 696 PSIATQTXPXPRXGPNXXPXPHP-PXHXPXPSPKTXXXP 809
P +A + P P P P P P P P P PK P
Sbjct: 32 PEVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEP 70
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 696 PSIATQTXPXPRXGPNXXPXPHP-PXHXPXPSPKTXXXP 809
P +A + P P P P P P P P P PK P
Sbjct: 10 PEVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEP 48
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 696 PSIATQTXPXPRXGPNXXPXPHP-PXHXPXPSPKTXXXP 809
P +A + P P P P P P P P P PK P
Sbjct: 10 PEVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEP 48
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 696 PSIATQTXPXPRXGPNXXPXPHP-PXHXPXPSPKTXXXP 809
P +A + P P P P P P P P P PK P
Sbjct: 32 PEVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEP 70
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 696 PSIATQTXPXPRXGPNXXPXPHP-PXHXPXPSPKTXXXP 809
P +A + P P P P P P P P P PK P
Sbjct: 32 PEVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEP 70
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 696 PSIATQTXPXPRXGPNXXPXPHP-PXHXPXPSPKTXXXP 809
P +A + P P P P P P P P P PK P
Sbjct: 32 PEVAVEPEPEPEPEPEPEPEPEPEPEPEPEPKPKPEVEP 70
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 681 PXXXXPSIATQTXPXPRXGPNXXPXPHPPXHXPXPSPKTXXXPC 812
P P Q P P P P P PP P P P PC
Sbjct: 44 PCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPC 87
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/53 (30%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +3
Query: 654 PRQXSXXLPPXXXXPSIATQTXPXPRXGPNXXPXPHP-PXHXPXPSPKTXXXP 809
P+ P P + P P+ PN P P P P P P PK P
Sbjct: 169 PKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKP 221
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = +3
Query: 654 PRQXSXXLPPXXXXPSIATQTXPXPRXGPNXXPXPHP---PXHXPXPSPKT 797
P+ P P + P P+ PN P P P P P P PKT
Sbjct: 207 PKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKT 257
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +3
Query: 654 PRQXSXXLPPXXXXPSIATQTXPXPRXGPNXXPXPHP-PXHXPXPSPKTXXXP 809
P+ P P + P P+ P P P+P P P P PK P
Sbjct: 199 PKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKP 251
Score = 29.1 bits (62), Expect = 5.7
Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +3
Query: 654 PRQXSXXLPPXXXXPSIATQTXPXPRXGPNXXPXPHP-PXHXPXPSPKTXXXP 809
P+ S P P + P P+ P P P P P P P P+ P
Sbjct: 155 PKLKSKPNPKPEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKP 207
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 5/57 (8%)
Frame = +3
Query: 654 PRQXSXXLPPXXXXPSIATQTXPXPRXGPNXXPXPHP-----PXHXPXPSPKTXXXP 809
P+ P P+ + P P+ PN P P+P P P P PK P
Sbjct: 267 PKLKPKPKPNPKPEPNPMPELKPKPKHKPNSRPKPNPRPKPKPRSKPNPKPKPRPKP 323
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/62 (27%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = +3
Query: 627 GGXHXXXAXPRQXSXXLPPXXXXPSIATQTXPXPRXGPNXXPXPHP-PXHXPXPSPKTXX 803
GG P+ PP P + P P+ P P P P P P P P+
Sbjct: 83 GGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEPQPEPQPEPHPEPAP 142
Query: 804 XP 809
P
Sbjct: 143 EP 144
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 130 VHGVGSERQNVHP-DAVXMHDLXKHGSEXXXGQELGIIAVHXDSTPXSVHD 279
++ + ER +HP D V + DL GS +E+GI + S+ ++HD
Sbjct: 158 IYELALERSKLHPSDCVFLDDL---GSNLKSAKEMGITTIKVVSSQQAIHD 205
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 678 PPXXXXPSIATQTXPXPRXGPNXXPXPHPPXHXPXP 785
PP P + + P P G P P PP P P
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP 310
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 7.6
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 678 PPXXXXPSIATQTXPXPRXGPNXXPXPHPPXHXPXPSPKTXXXP 809
PP PS P P P P P P H P P P P
Sbjct: 70 PPGPQGPS----DLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRP 109
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 7.6
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +2
Query: 719 PPAAGRSKPXTXPPPTXXPASXKSENXXXPLXXPIPNGR 835
PP R+ P PPP P + S P P P R
Sbjct: 143 PPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPR 181
Score = 28.3 bits (60), Expect = 10.0
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Frame = +3
Query: 678 PPXXXXPSIATQTXPXPRXGPNXXPXP--HPPXHXPXPSPK 794
PP P P PR P P P PP P P P+
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPR 181
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +3
Query: 678 PPXXXXPSIATQTXPXPRXGPNXXPXPHPPXHXPXP 785
PP P + + P P G P P PP P P
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP 320
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +2
Query: 590 PSTPPRGXXRTXWXXPPXXGGPXXXLXXXTSXXXXXLDRDA-NXPPAAGRSKPXTXPPPT 766
P PPRG T PP GG + R A P G P T PPT
Sbjct: 299 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG--SPPTGSPPT 356
Query: 767 XXP 775
P
Sbjct: 357 GRP 359
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +2
Query: 590 PSTPPRGXXRTXWXXPPXXGGPXXXLXXXTSXXXXXLDRDA-NXPPAAGRSKPXTXPPPT 766
P PPRG T PP GG + R A P G P T PPT
Sbjct: 320 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG--SPPTGSPPT 377
Query: 767 XXP 775
P
Sbjct: 378 GRP 380
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +2
Query: 590 PSTPPRGXXRTXWXXPPXXGGPXXXLXXXTSXXXXXLDRDA-NXPPAAGRSKPXTXPPPT 766
P PPRG T PP GG + R A P G P T PPT
Sbjct: 305 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG--SPPTGSPPT 362
Query: 767 XXP 775
P
Sbjct: 363 GRP 365
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.3 bits (60), Expect = 10.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 720 PXPRXGPNXXPXPHPPXHXPXPSPKTXXXPCXXXSQTXGC 839
P P P P P PP P P T PC C
Sbjct: 253 PPPPPCPMPIPCPPPPPACSCPPPVTMYQPCMVPQYVPRC 292
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 28.3 bits (60), Expect = 10.0
Identities = 15/53 (28%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +3
Query: 654 PRQXSXXLPPXXXXPSIATQTXPXPRXGPNXXPXPHP-PXHXPXPSPKTXXXP 809
P+ P P P P+ P P P+P P P P PK P
Sbjct: 70 PKHKPKPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPKPMPKHKPKP 122
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 28.3 bits (60), Expect = 10.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 696 PSIATQTXPXPRXGPNXXPXPHPPXHXPXPSPKT 797
PSI T T P P P P PP P S T
Sbjct: 207 PSIVTVTPPSPSVTPGGRPGSTPPATFPPGSVST 240
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.3 bits (60), Expect = 10.0
Identities = 29/112 (25%), Positives = 33/112 (29%), Gaps = 4/112 (3%)
Frame = +2
Query: 509 PTXXPRXTSXAXPXXTX----LXXEEITPQXPSTPPRGXXRTXWXXPPXXGGPXXXLXXX 676
P P+ T P T L E + P PP+G T PP G P
Sbjct: 189 PPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKG---TGSPTPPPTGEPQDLSGEG 245
Query: 677 TSXXXXXLDRDANXPPAAGRSKPXTXPPPTXXPASXKSENXXXPLXXPIPNG 832
+ PP G P PPPT P E P P G
Sbjct: 246 NASRRPP-------PPPKGTGSPP--PPPTGEPQDLSGEGNASRRPPPPPKG 288
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,326,964
Number of Sequences: 27780
Number of extensions: 210867
Number of successful extensions: 718
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2887577688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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