Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_D03
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 243 8e-64
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 243 8e-64
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 243 8e-64
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 243 8e-64
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 243 8e-64
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 243 8e-64
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 243 8e-64
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 243 8e-64
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 243 8e-64
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 243 8e-64
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 243 8e-64
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 243 8e-64
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 243 8e-64
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 243 8e-64
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 243 8e-64
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 243 8e-64
AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a p... 50 2e-05
U64791-1|AAB06460.1| 1179|Homo sapiens Golgi membrane sialoglyco... 31 7.5
U28811-1|AAB02178.1| 1177|Homo sapiens cysteine-rich fibroblast ... 31 7.5
BC060822-1|AAH60822.1| 1203|Homo sapiens golgi apparatus protein... 31 7.5
AK172806-1|BAD18777.1| 309|Homo sapiens protein ( Homo sapiens ... 31 7.5
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 29/55 (52%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSXKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 243 bits (594), Expect = 8e-64
Identities = 115/165 (69%), Positives = 138/165 (83%)
Frame = +3
Query: 135 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 314
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 315 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 494
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 495 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 629
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQXSV 865
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ SV
Sbjct: 210 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 571 QSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGIYPL 705
Q +K ++ + T + EVVNKLIPDSI KDIEKAC IYPL
Sbjct: 163 QIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL 207
>AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a
protein.
Length = 57
Score = 49.6 bits (113), Expect = 2e-05
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +2
Query: 713 VCIRKVKVLXXPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQ 856
V +RKVK+L P+FE+ KLMELH D K ER +GYEPPVQ
Sbjct: 5 VFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 56
>U64791-1|AAB06460.1| 1179|Homo sapiens Golgi membrane
sialoglycoprotein MG160 protein.
Length = 1179
Score = 30.7 bits (66), Expect = 7.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 565 SEQSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGI 696
SE + KC + + +T N+ +N ++ + DI K CHGI
Sbjct: 910 SELMDPKCKQMITKRQITQNTDYRLNPMLRKACKADIPKFCHGI 953
>U28811-1|AAB02178.1| 1177|Homo sapiens cysteine-rich fibroblast
growth factor receptor protein.
Length = 1177
Score = 30.7 bits (66), Expect = 7.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 565 SEQSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGI 696
SE + KC + + +T N+ +N ++ + DI K CHGI
Sbjct: 908 SELMDPKCKQMITKRQITQNTDYRLNPMLRKACKADIPKFCHGI 951
>BC060822-1|AAH60822.1| 1203|Homo sapiens golgi apparatus protein 1
protein.
Length = 1203
Score = 30.7 bits (66), Expect = 7.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 565 SEQSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGI 696
SE + KC + + +T N+ +N ++ + DI K CHGI
Sbjct: 910 SELMDPKCKQMITKRQITQNTDYRLNPMLRKACKADIPKFCHGI 953
>AK172806-1|BAD18777.1| 309|Homo sapiens protein ( Homo sapiens
cDNA FLJ23967 fis, clone HEP16652, highly similar to
Golgi apparatus protein 1 precursor. ).
Length = 309
Score = 30.7 bits (66), Expect = 7.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 565 SEQSERKCVKSLHATSLTLNSGEVVNKLIPDSIAKDIEKACHGI 696
SE + KC + + +T N+ +N ++ + DI K CHGI
Sbjct: 40 SELMDPKCKQMITKRQITQNTDYRLNPMLRKACKADIPKFCHGI 83
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,160,820
Number of Sequences: 237096
Number of extensions: 2617531
Number of successful extensions: 10001
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9967
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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