Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_C20
         (768 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0849 + 6896930-6896996,6897453-6897474,6897615-6897690,689...    41   0.001
05_05_0279 - 23794964-23795111,23795486-23795634,23796120-237962...    40   0.002
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731...    40   0.002
07_01_1199 + 11391638-11391718,11393477-11393590,11393690-113938...    38   0.009

>07_01_0849 +
           6896930-6896996,6897453-6897474,6897615-6897690,
           6897775-6897876,6898156-6898304,6898637-6898784
          Length = 187

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 19/45 (42%), Positives = 26/45 (57%)
 Frame = +3

Query: 6   FLLFXQVKMQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCE 140
           FL    +K+   LC +SG KIYPG G   ++ D +   F NSKC+
Sbjct: 21  FLGKEALKVWTELCRFSGAKIYPGKGIRFIRADSQVFLFSNSKCK 65


>05_05_0279 -
           23794964-23795111,23795486-23795634,23796120-23796221,
           23796309-23796384,23796578-23796588
          Length = 161

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +3

Query: 42  LCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCE 140
           LC +SG KIYPG G   ++ D +   F NSKC+
Sbjct: 7   LCRFSGQKIYPGKGIRFIRADSQVFLFANSKCK 39


>01_06_1123 + 34671365-34671883,34672366-34672625,34673045-34673143,
            34673237-34675178,34675588-34675658,34676158-34676307,
            34676963-34677038,34677131-34677232,34677707-34677855,
            34678214-34678364
          Length = 1172

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +3

Query: 42   LCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCE 140
            LC +SG KIYPG G   ++ D +   F NSKC+
Sbjct: 1017 LCRFSGQKIYPGKGIRFIRADSQVFLFANSKCK 1049


>07_01_1199 +
           11391638-11391718,11393477-11393590,11393690-11393826,
           11393905-11394064
          Length = 163

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M++  C +    +YPGHG   V+ D K   F  SKC     M R P
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNP 46


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,227,225
Number of Sequences: 37544
Number of extensions: 165590
Number of successful extensions: 287
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)