SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_C20
         (768 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M94314-1|AAC28251.1|  157|Homo sapiens ribosomal protein L30 pro...    66   2e-10
CR456729-1|CAG33010.1|  157|Homo sapiens RPL24 protein.                66   2e-10
BC070193-1|AAH70193.1|  157|Homo sapiens ribosomal protein L24 p...    66   2e-10
BC000690-1|AAH00690.1|  157|Homo sapiens ribosomal protein L24 p...    66   2e-10
AB061828-1|BAB79466.1|  157|Homo sapiens ribosomal protein L24 p...    66   2e-10
AL158815-1|CAI19461.1|  128|Homo sapiens se, the PEX6 gene for p...    65   3e-10
CR457179-1|CAG33460.1|  163|Homo sapiens C15orf15 protein.             36   0.16 
BC093067-1|AAH93067.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC035995-1|AAH35995.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC028672-1|AAH28672.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC026267-1|AAH26267.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC026266-1|AAH26266.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC016777-1|AAH16777.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC016725-1|AAH16725.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC016331-1|AAH16331.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC016312-1|AAH16312.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC012913-1|AAH12913.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC009604-1|AAH09604.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC009593-1|AAH09593.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC008499-1|AAH08499.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC008449-1|AAH08449.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC008422-1|AAH08422.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
BC008409-1|AAH08409.1|  163|Homo sapiens chromosome 15 open read...    36   0.16 
AF201949-1|AAF17241.1|  163|Homo sapiens 60S ribosomal protein L...    36   0.16 
AF165521-1|AAF86651.1|  163|Homo sapiens ribosomal protein L30 i...    36   0.16 
AF060926-1|AAG43138.1|  163|Homo sapiens My024 protein protein.        36   0.16 
BC014576-1|AAH14576.1|  163|Homo sapiens chromosome 15 open read...    35   0.28 

>M94314-1|AAC28251.1|  157|Homo sapiens ribosomal protein L30
           protein.
          Length = 157

 Score = 65.7 bits (153), Expect = 2e-10
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M++ LC++SGYKIYPGHG+   + DGK   FLN+KCE+A L  R P
Sbjct: 1   MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNP 46


>CR456729-1|CAG33010.1|  157|Homo sapiens RPL24 protein.
          Length = 157

 Score = 65.7 bits (153), Expect = 2e-10
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M++ LC++SGYKIYPGHG+   + DGK   FLN+KCE+A L  R P
Sbjct: 1   MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNP 46


>BC070193-1|AAH70193.1|  157|Homo sapiens ribosomal protein L24
           protein.
          Length = 157

 Score = 65.7 bits (153), Expect = 2e-10
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M++ LC++SGYKIYPGHG+   + DGK   FLN+KCE+A L  R P
Sbjct: 1   MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNP 46


>BC000690-1|AAH00690.1|  157|Homo sapiens ribosomal protein L24
           protein.
          Length = 157

 Score = 65.7 bits (153), Expect = 2e-10
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M++ LC++SGYKIYPGHG+   + DGK   FLN+KCE+A L  R P
Sbjct: 1   MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNP 46


>AB061828-1|BAB79466.1|  157|Homo sapiens ribosomal protein L24
           protein.
          Length = 157

 Score = 65.7 bits (153), Expect = 2e-10
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M++ LC++SGYKIYPGHG+   + DGK   FLN+KCE+A L  R P
Sbjct: 1   MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNP 46


>AL158815-1|CAI19461.1|  128|Homo sapiens se, the PEX6 gene for
           peroxisomal biogenesis factorA, member 8) protein.
          Length = 128

 Score = 64.9 bits (151), Expect = 3e-10
 Identities = 26/46 (56%), Positives = 33/46 (71%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M++ LC++SGYKIYPGHG+   + DGK   FLN+KCE A L  R P
Sbjct: 1   MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCELAFLSKRNP 46


>CR457179-1|CAG33460.1|  163|Homo sapiens C15orf15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC093067-1|AAH93067.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC035995-1|AAH35995.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC028672-1|AAH28672.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRDP 46


>BC026267-1|AAH26267.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC026266-1|AAH26266.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC016777-1|AAH16777.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC016725-1|AAH16725.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC016331-1|AAH16331.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC016312-1|AAH16312.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC012913-1|AAH12913.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC009604-1|AAH09604.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC009593-1|AAH09593.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC008499-1|AAH08499.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVIRFCKSKCHKNFKKKRNP 46


>BC008449-1|AAH08449.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC008422-1|AAH08422.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC008409-1|AAH08409.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>AF201949-1|AAF17241.1|  163|Homo sapiens 60S ribosomal protein L30
           isolog protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>AF165521-1|AAF86651.1|  163|Homo sapiens ribosomal protein L30
           isolog protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>AF060926-1|AAG43138.1|  163|Homo sapiens My024 protein protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 0.16
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNP 46


>BC014576-1|AAH14576.1|  163|Homo sapiens chromosome 15 open reading
           frame 15 protein.
          Length = 163

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 30  MQIGLCAYSGYKIYPGHGKNMVKVDGKPSHFLNSKCEAAHLMXRXP 167
           M+I  C +    IYPGHG   V+ D K   F  SKC       R P
Sbjct: 1   MRIEKCYFCSGPIYPGHGMMFVRNDCKVFGFCKSKCHKNFKKKRNP 46


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,741,354
Number of Sequences: 237096
Number of extensions: 849609
Number of successful extensions: 1338
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -