Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_C17
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    26   0.53 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   2.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.5  

>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 129 RGFVRLGAAMVASAGLRAAGHGVPRVARRQLRGAVQR 239
           +GFV LGA +       AAG  +  V    +RG  Q+
Sbjct: 89  KGFVHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQ 125


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 316 PTSGAHMNPAVTLAAALQGRMSP 384
           P SG H + A  LAA L G + P
Sbjct: 515 PPSGHHASSAPLLAATLAGGLCP 537


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 365 SAAASVTAGFMCAPDVGPNAIALPS 291
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 365 SAAASVTAGFMCAPDVGPNAIALPS 291
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 269 AGCDSTTASFPLYGTTELTPSHTRNAVASSSETS 168
           A   ST+ S+P  G++  +PS   +  +S S TS
Sbjct: 74  AAITSTSPSYPGGGSSSPSPSSPSSFFSSVSPTS 107


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 365 SAAASVTAGFMCAPDVGPNAIALPS 291
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,131
Number of Sequences: 438
Number of extensions: 3059
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)