Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_C16
(863 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 32 3.1
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 32 3.1
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 32 3.1
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 32 3.1
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 32 3.1
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 32 3.1
BC068505-1|AAH68505.1| 644|Homo sapiens zinc finger protein 746... 31 4.1
AK128244-1|BAC87351.1| 459|Homo sapiens protein ( Homo sapiens ... 31 4.1
AK055975-1|BAB71061.1| 242|Homo sapiens protein ( Homo sapiens ... 31 4.1
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating... 31 5.4
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein. 31 5.4
AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens ... 31 5.4
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 30 9.5
AY048121-1|AAK85703.1| 659|Homo sapiens RAS guanyl releasing pr... 30 9.5
AY048119-1|AAK85701.1| 673|Homo sapiens RAS guanyl releasing pr... 30 9.5
AL136170-3|CAI19419.1| 1086|Homo sapiens ring finger and CCCH-ty... 30 9.5
AL136170-2|CAI19417.1| 1094|Homo sapiens ring finger and CCCH-ty... 30 9.5
AL136170-1|CAI19418.1| 1133|Homo sapiens ring finger and CCCH-ty... 30 9.5
AL121983-3|CAH70710.1| 1086|Homo sapiens ring finger and CCCH-ty... 30 9.5
AL121983-2|CAH70709.1| 1094|Homo sapiens ring finger and CCCH-ty... 30 9.5
AL121983-1|CAI12318.1| 1133|Homo sapiens ring finger and CCCH-ty... 30 9.5
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 30 9.5
AB095945-1|BAC23121.1| 1109|Homo sapiens KIAA2025 protein protein. 30 9.5
>U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein.
Length = 358
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +1
Query: 139 ANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 306
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 157 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 212
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +1
Query: 139 ANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 306
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +1
Query: 139 ANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 306
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 206 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 261
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +1
Query: 139 ANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 306
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +1
Query: 139 ANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 306
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +1
Query: 139 ANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 306
A A PV + A NGY P+ +P P PNG P + A VDP Q
Sbjct: 240 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 295
>BC068505-1|AAH68505.1| 644|Homo sapiens zinc finger protein 746
protein.
Length = 644
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 247 PNGNGYEPIDNGAYYVDPPQG-RPYFKPTPFPGARGG 354
P G Y DNG +DP Q RP+ +P +PG G
Sbjct: 397 PEGLPYSSPDNGEAILDPSQAPRPFNEPCKYPGRTKG 433
>AK128244-1|BAC87351.1| 459|Homo sapiens protein ( Homo sapiens
cDNA FLJ46378 fis, clone TESTI4052775. ).
Length = 459
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 247 PNGNGYEPIDNGAYYVDPPQG-RPYFKPTPFPGARGG 354
P G Y DNG +DP Q RP+ +P +PG G
Sbjct: 212 PEGLPYSSPDNGEAILDPSQAPRPFNEPCKYPGRTKG 248
>AK055975-1|BAB71061.1| 242|Homo sapiens protein ( Homo sapiens
cDNA FLJ31413 fis, clone NT2NE2000259, moderately
similar to OOCYTE ZINC FINGER PROTEIN XLCOF6.1. ).
Length = 242
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 247 PNGNGYEPIDNGAYYVDPPQG-RPYFKPTPFPGARGG 354
P G Y DNG +DP Q RP+ +P +PG G
Sbjct: 43 PEGLPYSSPDNGEAILDPSQAPRPFNEPCKYPGRTKG 79
>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
factor protein.
Length = 1404
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 173 TLTQETATNLLTTARTSLILPKITTLMETAT 265
T TQ+T +TT +T+ + PK+TT +T T
Sbjct: 963 TTTQDTTPFKITTLKTTTLAPKVTTTKKTIT 993
>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
Length = 1404
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 173 TLTQETATNLLTTARTSLILPKITTLMETAT 265
T TQ+T +TT +T+ + PK+TT +T T
Sbjct: 963 TTTQDTTPFKITTLKTTTLAPKVTTTKKTIT 993
>AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens
cDNA FLJ16561 fis, clone SYNOV4003981, moderately
similar to Homo sapiens proteoglycan 4, (megakaryocyte
stimulating ).
Length = 933
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 173 TLTQETATNLLTTARTSLILPKITTLMETAT 265
T TQ+T +TT +T+ + PK+TT +T T
Sbjct: 492 TTTQDTTPFKITTLKTTTLAPKVTTTKKTIT 522
>AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 465
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/56 (33%), Positives = 23/56 (41%)
Frame = +1
Query: 139 ANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 306
A A PV + A NGY P+ +P P PNG P + VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPVAPVDPLQ 319
>AY048121-1|AAK85703.1| 659|Homo sapiens RAS guanyl releasing
protein 4 variant 2 protein.
Length = 659
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 266 NLSTTVHITWTLPKADLTSSLPLSLVLAVGSKEYLRKLI 382
N+ +H +W LP ADL + L S A G + LR+L+
Sbjct: 83 NMVLAMH-SWVLPSADLAARLLTSYQKATGDTQELRRLL 120
>AY048119-1|AAK85701.1| 673|Homo sapiens RAS guanyl releasing
protein 4 protein.
Length = 673
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 266 NLSTTVHITWTLPKADLTSSLPLSLVLAVGSKEYLRKLI 382
N+ +H +W LP ADL + L S A G + LR+L+
Sbjct: 83 NMVLAMH-SWVLPSADLAARLLTSYQKATGDTQELRRLL 120
>AL136170-3|CAI19419.1| 1086|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1086
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 199 PIDNRPYIVNPPKDYNPNGNGYEPIDN-GAYYVDPPQGRPYFKPTPF 336
P D P V P P G+ P YY DP P F+P P+
Sbjct: 523 PADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEPAPY 569
>AL136170-2|CAI19417.1| 1094|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1094
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 199 PIDNRPYIVNPPKDYNPNGNGYEPIDN-GAYYVDPPQGRPYFKPTPF 336
P D P V P P G+ P YY DP P F+P P+
Sbjct: 523 PADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEPAPY 569
>AL136170-1|CAI19418.1| 1133|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1133
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 199 PIDNRPYIVNPPKDYNPNGNGYEPIDN-GAYYVDPPQGRPYFKPTPF 336
P D P V P P G+ P YY DP P F+P P+
Sbjct: 562 PADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEPAPY 608
>AL121983-3|CAH70710.1| 1086|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1086
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 199 PIDNRPYIVNPPKDYNPNGNGYEPIDN-GAYYVDPPQGRPYFKPTPF 336
P D P V P P G+ P YY DP P F+P P+
Sbjct: 523 PADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEPAPY 569
>AL121983-2|CAH70709.1| 1094|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1094
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 199 PIDNRPYIVNPPKDYNPNGNGYEPIDN-GAYYVDPPQGRPYFKPTPF 336
P D P V P P G+ P YY DP P F+P P+
Sbjct: 523 PADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEPAPY 569
>AL121983-1|CAI12318.1| 1133|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1133
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 199 PIDNRPYIVNPPKDYNPNGNGYEPIDN-GAYYVDPPQGRPYFKPTPF 336
P D P V P P G+ P YY DP P F+P P+
Sbjct: 562 PADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEPAPY 608
>AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 462
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/56 (33%), Positives = 23/56 (41%)
Frame = +1
Query: 139 ANAQDPVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 306
A A PV + A NGY P+ +P P PNG P + VDP Q
Sbjct: 264 AIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPVAPVDPLQ 319
>AB095945-1|BAC23121.1| 1109|Homo sapiens KIAA2025 protein protein.
Length = 1109
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 199 PIDNRPYIVNPPKDYNPNGNGYEPIDN-GAYYVDPPQGRPYFKPTPF 336
P D P V P P G+ P YY DP P F+P P+
Sbjct: 538 PADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEPAPY 584
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,276,287
Number of Sequences: 237096
Number of extensions: 1962546
Number of successful extensions: 11224
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 11058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11214
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -