Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_C16
         (863 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039047-13|AAM15587.1|  402|Caenorhabditis elegans Coexpressed ...    36   0.028
Z81082-6|CAB03098.1|  279|Caenorhabditis elegans Hypothetical pr...    33   0.26 
AL034543-5|CAA22519.1|  279|Caenorhabditis elegans Hypothetical ...    33   0.26 
AL034543-1|CAA22516.1|  243|Caenorhabditis elegans Hypothetical ...    33   0.26 
AF025471-4|AAB71063.1|  151|Caenorhabditis elegans Hypothetical ...    30   2.4  
Z81520-4|CAE17808.1|  181|Caenorhabditis elegans Hypothetical pr...    29   5.7  
AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical ...    29   5.7  
Z82284-1|CAB05287.1|  226|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z82262-1|CAB05151.2|  361|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z81143-5|CAB03518.2|  370|Caenorhabditis elegans Hypothetical pr...    28   9.9  
U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical pr...    28   9.9  

>AF039047-13|AAM15587.1|  402|Caenorhabditis elegans Coexpressed
           with polycystins protein4 protein.
          Length = 402

 Score = 36.3 bits (80), Expect = 0.028
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
 Frame = +2

Query: 125 LCWLWPTLKTQLR*WKTLTQETATNLLTTARTSLILPKITTLMETATNLSTTVHI---TW 295
           LC+LW  L T      T T  T T+ + T  T++++   TT        +TTV +   T 
Sbjct: 179 LCYLWVPLTTTTT--TTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTT 236

Query: 296 TLPKADLTSSLPLS 337
           T+P  + T++ PL+
Sbjct: 237 TVPTNETTTTSPLN 250


>Z81082-6|CAB03098.1|  279|Caenorhabditis elegans Hypothetical
           protein F42G4.6 protein.
          Length = 279

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +1

Query: 163 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 303
           +VE+ D GN   P ++   P  +N PK    + NG +P+DN   YV+ P
Sbjct: 40  LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86


>AL034543-5|CAA22519.1|  279|Caenorhabditis elegans Hypothetical
           protein F42G4.6 protein.
          Length = 279

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +1

Query: 163 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 303
           +VE+ D GN   P ++   P  +N PK    + NG +P+DN   YV+ P
Sbjct: 40  LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86


>AL034543-1|CAA22516.1|  243|Caenorhabditis elegans Hypothetical
           protein Y81G3A.1 protein.
          Length = 243

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +1

Query: 163 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPP 303
           +VE+ D GN   P ++   P  +N PK    + NG +P+DN   YV+ P
Sbjct: 40  LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86


>AF025471-4|AAB71063.1|  151|Caenorhabditis elegans Hypothetical
           protein R52.6 protein.
          Length = 151

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +2

Query: 173 TLTQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTL 301
           TL  E  T ++TT  TS +  K+   M  AT       + WTL
Sbjct: 47  TLPYEETTEMMTTMETSTMTEKVCPEMPAATACMDLTTLGWTL 89


>Z81520-4|CAE17808.1|  181|Caenorhabditis elegans Hypothetical
           protein F31B9.4 protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +2

Query: 140 PTLKTQLR*WKTLTQET--ATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLP 304
           P + T +R   T T  T  A N+ TT  T+ I P   T     T  +TTV  T T P
Sbjct: 17  PVITTTIRPNSTTTTTTSPAPNITTTTTTTTIAPPTNTTTTILTT-TTTVTTTTTSP 72


>AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical
           protein R06B10.1 protein.
          Length = 1236

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = +1

Query: 178 DSGNGYEPIDNRPYIVNPPKDYNPNGNGY--EPIDNGAYY---VDPPQ 306
           D+ N Y+P++    +VNP K    + NG+  + + + A Y   VDPP+
Sbjct: 824 DNANAYKPMNPIEMVVNPTKYAKKSSNGFMEKVVKDIAEYPKPVDPPK 871


>Z82284-1|CAB05287.1|  226|Caenorhabditis elegans Hypothetical
           protein T27E7.1 protein.
          Length = 226

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
 Frame = +1

Query: 169 ENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYE--PIDNGAYYVDPPQGRPYFKPT--PF 336
           +N   G  + P  N   + N P  +     GY   P         PP+G  Y++P   P+
Sbjct: 34  QNPQPGASFPP--NMNPVTNGPGSWTQKPGGYNNGPGSGSFKSTKPPRGLVYYQPKNYPY 91

Query: 337 PGARGGK 357
              +GGK
Sbjct: 92  KPGKGGK 98


>Z82262-1|CAB05151.2|  361|Caenorhabditis elegans Hypothetical
           protein C43F9.4 protein.
          Length = 361

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = +1

Query: 103 FFMIFVLALLAMANAQD---PVKVVENADSGNGYEPIDNRPYI 222
           F++IF++ ++ M +  D   P+   +N D  N +EP   RP+I
Sbjct: 29  FWVIFIVIIVVMTHFNDYSEPIVPWDNCDMNNTWEP-TTRPFI 70


>Z81143-5|CAB03518.2|  370|Caenorhabditis elegans Hypothetical
           protein ZK265.7 protein.
          Length = 370

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +2

Query: 167 WKTLTQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWT 298
           WK  T        TT +  +  PK TTL +T T  +T+   T T
Sbjct: 134 WKKFTTTEEPLETTTTKRIITTPKRTTLRKTTTTTTTSTTSTST 177


>U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical
           protein F10G7.6 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +1

Query: 196 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 282
           EP D  P + V PP  + PN NG  P  NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,942,843
Number of Sequences: 27780
Number of extensions: 294386
Number of successful extensions: 800
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)