Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_C15
         (894 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    25   1.2  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    25   1.2  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    25   1.2  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    25   1.2  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   5.0  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   5.0  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    23   5.0  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    23   5.0  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    22   6.6  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   6.6  

>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 180 IHRILENLFKTNCYKYLSNNDNNNK 106
           I  +  N    N YKY  NN+N NK
Sbjct: 82  ISSLSNNTIHNNNYKYNYNNNNYNK 106


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 180 IHRILENLFKTNCYKYLSNNDNNNK 106
           I  +  N    N YKY  NN+N NK
Sbjct: 82  ISSLSNNTIHNNNYKYNYNNNNYNK 106


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 180 IHRILENLFKTNCYKYLSNNDNNNK 106
           I  +  N    N YKY  NN+N NK
Sbjct: 82  ISSLSNNTIHNNNYKYNYNNNNYNK 106


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 180 IHRILENLFKTNCYKYLSNNDNNNK 106
           I  +  N    N YKY  NN+N NK
Sbjct: 82  ISSLSNNTIHNNNYKYNYNNNNYNK 106


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 186 PYIHRILENLFKTNCYKYLSNNDNNN 109
           P I   L N +K + Y   +NN NNN
Sbjct: 79  PKIISSLSNNYKYSNYNNYNNNYNNN 104


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 186 PYIHRILENLFKTNCYKYLSNNDNNN 109
           P I   L N +K + Y   +NN NNN
Sbjct: 79  PKIISSLSNNYKYSNYNNYNNNYNNN 104


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 180 IHRILENLFKTNCYKYLSNNDNNN 109
           I  +  N    N YKY  NN+N N
Sbjct: 81  ISSLSNNTIHNNNYKYNYNNNNYN 104


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 180 IHRILENLFKTNCYKYLSNNDNNN 109
           I  +  N    N YKY  NN+N N
Sbjct: 81  ISSLSNNTIHNNNYKYNYNNNNYN 104


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 66  YFGINGLFKF 95
           YFGING F+F
Sbjct: 120 YFGINGGFRF 129


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -3

Query: 241 CAWCCDS 221
           C WCCD+
Sbjct: 12  CCWCCDN 18


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,227
Number of Sequences: 438
Number of extensions: 1471
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)