Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_C12
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 26 0.83
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 26 0.83
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 26 0.85
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 24 6.5
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 25 6.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 24 6.7
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 24 6.8
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 8.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 25.8 bits (54), Expect(2) = 0.83
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 649 PPPPPPLNXXXFRGG 605
PPPPPP F+GG
Sbjct: 769 PPPPPPPPPGGFKGG 783
Score = 23.8 bits (49), Expect(2) = 0.83
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 652 PPPPPPP 632
PPPPPPP
Sbjct: 758 PPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 25.8 bits (54), Expect(2) = 0.83
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 649 PPPPPPLNXXXFRGG 605
PPPPPP F+GG
Sbjct: 769 PPPPPPPPPGGFKGG 783
Score = 23.8 bits (49), Expect(2) = 0.83
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 652 PPPPPPP 632
PPPPPPP
Sbjct: 759 PPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 25.8 bits (54), Expect(2) = 0.85
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 649 PPPPPPLNXXXFRGG 605
PPPPPP F+GG
Sbjct: 352 PPPPPPPPPGGFKGG 366
Score = 23.8 bits (49), Expect(2) = 0.85
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 652 PPPPPPP 632
PPPPPPP
Sbjct: 341 PPPPPPP 347
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 653 PPPPPXPPXXFXXSWGGGXGXXXXXXXGGGG 561
PPPPP PP G G GGGG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGGYSEQSSGGGGG 333
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 653 PPPPPXPPXXFXXSWGGGXGXXXXXXXGGGG 561
PPPPP PP G G GGGG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGGYSEQSSGGGGG 333
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 647 PPPXPPXXFXXSWGGGXGXXXXXXXGGGG 561
PPP PP GGG G GGGG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGGGG 139
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 653 PPPPPXPPXXFXXSWGGGXGXXXXXXXGGGG 561
PPPPP GGG G GGGG
Sbjct: 54 PPPPPPACGGGCGGGGGGCGGGGGGCGGGGG 84
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 589 CXPXPPPHEXXXNXGGXGGGGG 654
C P PPP GG GGG G
Sbjct: 52 CAPPPPPPACGGGCGGGGGGCG 73
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 589 CXPXPPPHEXXXNXGGXGGGGG 654
C P PPP GG GGG G
Sbjct: 109 CAPPPPPPACGGGCGGGGGGCG 130
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 23.8 bits (49), Expect(2) = 6.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 652 PPPPPPP 632
PPPPPPP
Sbjct: 1356 PPPPPPP 1362
Score = 22.6 bits (46), Expect(2) = 6.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 649 PPPPPPL 629
PPPPPPL
Sbjct: 1390 PPPPPPL 1396
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 25.0 bits (52), Expect(2) = 6.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 649 PPPPPPLNXXXFRGGXA 599
PPPPPPL +G A
Sbjct: 551 PPPPPPLPLDLLKGAVA 567
Score = 21.4 bits (43), Expect(2) = 6.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 652 PPPPPPPL 629
PPPPPP L
Sbjct: 503 PPPPPPLL 510
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 23.8 bits (49), Expect(2) = 6.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 652 PPPPPPP 632
PPPPPPP
Sbjct: 768 PPPPPPP 774
Score = 22.6 bits (46), Expect(2) = 6.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 649 PPPPPPL 629
PPPPPPL
Sbjct: 794 PPPPPPL 800
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 23.8 bits (49), Expect(2) = 6.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 652 PPPPPPP 632
PPPPPPP
Sbjct: 768 PPPPPPP 774
Score = 22.6 bits (46), Expect(2) = 6.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 649 PPPPPPL 629
PPPPPPL
Sbjct: 794 PPPPPPL 800
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 526 GGGEXXXXXXXXPPPPXXFXXCXPXPPP 609
GGG PPP C P PPP
Sbjct: 28 GGGGCAPAAPACAPPPPPMCGCAPPPPP 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,881,124
Number of Sequences: 27780
Number of extensions: 224944
Number of successful extensions: 3480
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2118
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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