Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_C10
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0140 + 12255418-12255512,12257514-12257793                      131   8e-31
08_02_1181 - 24985963-24986242,24987109-24987197                      128   7e-30
02_05_0532 - 29814199-29814478,29814922-29814969,29815558-29815649    110   2e-24
07_03_0256 - 15875066-15877025,15877292-15877911                       28   8.4  

>06_02_0140 + 12255418-12255512,12257514-12257793
          Length = 124

 Score =  131 bits (316), Expect = 8e-31
 Identities = 63/115 (54%), Positives = 81/115 (70%), Gaps = 2/115 (1%)
 Frame = +1

Query: 103 KGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTR 282
           K +R G +  +EVVTREYT+NLHKRLHG  FKK+AP AIKEIRKFA+K MGT D+RVD +
Sbjct: 4   KKQRPGGARKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTIDVRVDVK 63

Query: 283 LNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTY--VPVASIKGLADR 441
           LNK +WS G+R+VP           ND+ED+  +L++LVT   VP   +KGL  +
Sbjct: 64  LNKHIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPQEGLKGLGTK 118


>08_02_1181 - 24985963-24986242,24987109-24987197
          Length = 122

 Score =  128 bits (308), Expect = 7e-30
 Identities = 63/114 (55%), Positives = 80/114 (70%), Gaps = 3/114 (2%)
 Frame = +1

Query: 109 ERKGKSAINE-VVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRL 285
           E+KG +A  E VVTREYT+NLHKRLH   FKK+AP AIKEIRKFA+K MGT D+RVD +L
Sbjct: 3   EKKGGAARKEEVVTREYTINLHKRLHSCTFKKKAPNAIKEIRKFAQKAMGTTDVRVDVKL 62

Query: 286 NKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTY--VPVASIKGLADR 441
           NK +WS G+R+VP           ND+ED+  +L++LVT   VP   +KGL  +
Sbjct: 63  NKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPPEGLKGLGTK 116


>02_05_0532 - 29814199-29814478,29814922-29814969,29815558-29815649
          Length = 139

 Score =  110 bits (264), Expect = 2e-24
 Identities = 58/121 (47%), Positives = 76/121 (62%), Gaps = 18/121 (14%)
 Frame = +1

Query: 133 NEVVTREYTVNLHKRLHGV----------------GFKKRAPRAIKEIRKFAEKQMGTPD 264
           +EVVTREYT+NLHKRLHG                  FKK+AP AIKEIRKFA+K MGT D
Sbjct: 13  DEVVTREYTINLHKRLHGCIVCSNDLIHYAPDIVSTFKKKAPNAIKEIRKFAQKAMGTTD 72

Query: 265 IRVDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTY--VPVASIKGLAD 438
           IR+D +LNK +W+ G+R+VP           ND+ED+  +L++LVT   +P   +KGL  
Sbjct: 73  IRIDVKLNKAIWTNGIRSVPRRVRVRISRKRNDEEDAKEELYSLVTVAEIPAEGLKGLGT 132

Query: 439 R 441
           +
Sbjct: 133 K 133


>07_03_0256 - 15875066-15877025,15877292-15877911
          Length = 859

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 333 DTEGNISDSLRPKEFV*AGVYSNVRSSHLFFSELSDFFDCS 211
           DT+G IS  LR    V  G       ++  + E+ + FDCS
Sbjct: 119 DTQGGISQRLRTMAIVGCGGLGKTTLANQVYLEVKNQFDCS 159


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,503,180
Number of Sequences: 37544
Number of extensions: 325555
Number of successful extensions: 647
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)