Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_C09
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0780 + 5824367-5825335                                           31   0.93 
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993...    30   2.8  
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026...    29   3.7  
07_03_1345 + 25919379-25920866,25921342-25921962,25922733-259228...    29   6.5  
06_03_1157 - 28074675-28074710,28075318-28075514,28075676-280758...    28   8.6  
03_01_0136 + 1069136-1069292,1070783-1071060,1071246-1071602,107...    28   8.6  
01_06_1648 - 38897268-38897480,38897816-38897884,38899712-38900038     28   8.6  

>06_01_0780 + 5824367-5825335
          Length = 322

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +2

Query: 275 DRKKVIEEWVKAGRSTGLHIQVQVGGAPLPXRAGIGGV-LSKKWRWFDSNATGTILQ 442
           D  +V      AG +   ++ ++   APLP  AGI GV L   + W  SN  G  L+
Sbjct: 159 DASRVFIAGDSAGANIAHNVAMRAAAAPLPGGAGITGVLLMHPYFWDASNTMGPALE 215


>01_05_0722 +
           24598426-24598649,24599113-24599219,24599319-24599374,
           24599469-24599675,24599757-24599963,24600037-24600123,
           24600167-24600208,24600209-24600304,24600406-24600621,
           24600693-24600875,24601014-24601241
          Length = 550

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +2

Query: 209 EAGFKCVLVGGTTGEHMSLNVADRKKVIEEWVKAGRSTGLHIQVQVGGAPLP 364
           +AG     VGG  G H+S    D+  V    +KA +  G     QV  A LP
Sbjct: 55  DAGMSAAEVGGVVGSHLSETRFDQCPVSPLSLKAIKDAGYEKMTQVQEATLP 106


>02_04_0448 -
           23001579-23001683,23001783-23002382,23002479-23002628,
           23002788-23003015,23003188-23003302,23003392-23004659,
           23006621-23006692
          Length = 845

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +1

Query: 625 DLSEASQVLRAMSEKKALFLGADTLLAPA-ALLGIKSSIGTSFNLFPKIAHAILS 786
           D S  SQ L   + K +   G  TL   A A  G+KSS G   +L+P I   + S
Sbjct: 224 DTSLGSQPLDTQNSKSSGARGLKTLSVEAPATSGVKSSQGQQASLYPSIEELLFS 278


>07_03_1345 +
           25919379-25920866,25921342-25921962,25922733-25922893,
           25923284-25923422,25923509-25923592,25923944-25923982,
           25924037-25924222,25924347-25924478,25924810-25925009,
           25925294-25925498,25925618-25925944
          Length = 1193

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -3

Query: 733 SILCRAGPPVLKACPLQGIVPF 668
           S +C+A P VL  CP  G  PF
Sbjct: 402 SCMCKAAPLVLTECPFSGPYPF 423


>06_03_1157 -
           28074675-28074710,28075318-28075514,28075676-28075875,
           28076190-28076287,28076798-28076854,28076952-28077010,
           28077705-28077738,28077840-28077890
          Length = 243

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +1

Query: 544 VEINMPAFVTEASKKIPNFAGIKFTSNDLSEASQVLRAMSEKKALFLGADTL 699
           +E+ +   + EASK     A ++   ND  EA +  +A  E+ A  L +DTL
Sbjct: 66  LEVILNGKINEASKLSSRIADLESQLNDEKEACERSQARFERFADLLASDTL 117


>03_01_0136 +
           1069136-1069292,1070783-1071060,1071246-1071602,
           1071706-1072119,1072221-1072302,1072429-1073093
          Length = 650

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +1

Query: 520 YHIPSMTRVEI-NMPAFVTEASKKIPNFAGIKFTSNDLSE 636
           +H  +  +VEI +M  F  E  K++ N  G+K  +NDL E
Sbjct: 364 HHESARLQVEIADMEVFKDE-KKRVENLRGVKLVNNDLGE 402


>01_06_1648 - 38897268-38897480,38897816-38897884,38899712-38900038
          Length = 202

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = +1

Query: 178 GYTWICQIHGGSWLQMCTRWWYDRRAYVSK-RSGQEESYRRMGESGKEHWSSHTGTSRWC 354
           G TW     G + L M T   Y RR    +   G++E  + +   G   W +   + RWC
Sbjct: 15  GSTWS---DGSTLLHMATVRQYSRRTPTGETHGGRQEKAQGIARPGPALWKAVPRSRRWC 71


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,462,449
Number of Sequences: 37544
Number of extensions: 596381
Number of successful extensions: 1630
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)