Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_C06
         (882 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U72395-1|AAB68948.1|  890|Homo sapiens MIP protein.                    56   2e-07
U72069-1|AAB58254.1|  890|Homo sapiens karyopherin beta2 protein.      56   2e-07
U70322-1|AAC50723.1|  890|Homo sapiens transportin protein.            56   2e-07
BC040340-1|AAH40340.1|  890|Homo sapiens transportin 1 protein.        56   2e-07
BC072420-1|AAH72420.1|  887|Homo sapiens transportin 2 (importin...    51   5e-06
BC018314-1|AAH18314.1|  771|Homo sapiens Unknown (protein for IM...    51   5e-06
AF019039-1|AAB83973.1|  896|Homo sapiens transportin2 protein.         51   5e-06
AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein p...    51   5e-06
AF007748-1|AAB71349.1|  887|Homo sapiens karyopherin beta2b homo...    49   2e-05

>U72395-1|AAB68948.1|  890|Homo sapiens MIP protein.
          Length = 890

 Score = 56.0 bits (129), Expect = 2e-07
 Identities = 25/44 (56%), Positives = 30/44 (68%)
 Frame = +1

Query: 112 MKMEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGKXEQXP 243
           M+ EWKP+++G  QIL LLKESQSPD   QR V QK  +  Q P
Sbjct: 1   MEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYP 44


>U72069-1|AAB58254.1|  890|Homo sapiens karyopherin beta2 protein.
          Length = 890

 Score = 56.0 bits (129), Expect = 2e-07
 Identities = 25/44 (56%), Positives = 30/44 (68%)
 Frame = +1

Query: 112 MKMEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGKXEQXP 243
           M+ EWKP+++G  QIL LLKESQSPD   QR V QK  +  Q P
Sbjct: 1   MEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYP 44


>U70322-1|AAC50723.1|  890|Homo sapiens transportin protein.
          Length = 890

 Score = 56.0 bits (129), Expect = 2e-07
 Identities = 25/44 (56%), Positives = 30/44 (68%)
 Frame = +1

Query: 112 MKMEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGKXEQXP 243
           M+ EWKP+++G  QIL LLKESQSPD   QR V QK  +  Q P
Sbjct: 1   MEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYP 44


>BC040340-1|AAH40340.1|  890|Homo sapiens transportin 1 protein.
          Length = 890

 Score = 56.0 bits (129), Expect = 2e-07
 Identities = 25/44 (56%), Positives = 30/44 (68%)
 Frame = +1

Query: 112 MKMEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGKXEQXP 243
           M+ EWKP+++G  QIL LLKESQSPD   QR V QK  +  Q P
Sbjct: 1   MEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYP 44


>BC072420-1|AAH72420.1|  887|Homo sapiens transportin 2 (importin 3,
           karyopherin beta 2b) protein.
          Length = 887

 Score = 51.2 bits (117), Expect = 5e-06
 Identities = 21/42 (50%), Positives = 30/42 (71%)
 Frame = +1

Query: 118 MEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGKXEQXP 243
           M+W+P+++G  Q+L LLK+SQSP+ ATQR V  K  +  Q P
Sbjct: 1   MDWQPDEQGLQQVLQLLKDSQSPNTATQRIVQDKLKQLNQFP 42


>BC018314-1|AAH18314.1|  771|Homo sapiens Unknown (protein for
           IMAGE:4154236) protein.
          Length = 771

 Score = 51.2 bits (117), Expect = 5e-06
 Identities = 21/42 (50%), Positives = 30/42 (71%)
 Frame = +1

Query: 118 MEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGKXEQXP 243
           M+W+P+++G  Q+L LLK+SQSP+ ATQR V  K  +  Q P
Sbjct: 1   MDWQPDEQGLQQVLQLLKDSQSPNTATQRIVQDKLKQLNQFP 42


>AF019039-1|AAB83973.1|  896|Homo sapiens transportin2 protein.
          Length = 896

 Score = 51.2 bits (117), Expect = 5e-06
 Identities = 21/42 (50%), Positives = 30/42 (71%)
 Frame = +1

Query: 118 MEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGKXEQXP 243
           M+W+P+++G  Q+L LLK+SQSP+ ATQR V  K  +  Q P
Sbjct: 1   MDWQPDEQGLQQVLQLLKDSQSPNTATQRIVQDKLKQLNQFP 42


>AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein
           protein.
          Length = 1051

 Score = 51.2 bits (117), Expect = 5e-06
 Identities = 21/42 (50%), Positives = 30/42 (71%)
 Frame = +1

Query: 118 MEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGKXEQXP 243
           M+W+P+++G  Q+L LLK+SQSP+ ATQR V  K  +  Q P
Sbjct: 165 MDWQPDEQGLQQVLQLLKDSQSPNTATQRIVQDKLKQLNQFP 206


>AF007748-1|AAB71349.1|  887|Homo sapiens karyopherin beta2b homolog
           protein.
          Length = 887

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 20/42 (47%), Positives = 29/42 (69%)
 Frame = +1

Query: 118 MEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGKXEQXP 243
           M+W+P+++G  Q+L LLK+SQSP+ AT R V  K  +  Q P
Sbjct: 1   MDWQPDEQGLQQVLQLLKDSQSPNTATHRIVRDKLKQLNQFP 42


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,378,500
Number of Sequences: 237096
Number of extensions: 1187292
Number of successful extensions: 1337
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)