Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_C06
         (882 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF059613-1|AAC25708.1|  893|Drosophila melanogaster transportin ...    50   4e-06
AE014296-1099|AAN12090.1|  893|Drosophila melanogaster CG7398-PC...    50   4e-06
AE014296-1098|AAN12089.1|  893|Drosophila melanogaster CG7398-PB...    50   4e-06
AE014296-1097|AAF50674.1|  893|Drosophila melanogaster CG7398-PA...    50   4e-06
BT003191-1|AAO24946.1|  893|Drosophila melanogaster RE59670p pro...    48   1e-05
AY118705-1|AAM50565.1|  853|Drosophila melanogaster AT21921p pro...    42   0.001
AE014296-1100|AAF50673.2|  853|Drosophila melanogaster CG8219-PA...    42   0.001

>AF059613-1|AAC25708.1|  893|Drosophila melanogaster transportin
           protein.
          Length = 893

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +1

Query: 118 MEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGKXEQXP 243
           M W+P+ EG  QI+ +LKESQSPD ATQ AV  K  +  + P
Sbjct: 1   MTWEPQGEGLQQIIAILKESQSPDTATQMAVQMKLEEFNRYP 42


>AE014296-1099|AAN12090.1|  893|Drosophila melanogaster CG7398-PC,
           isoform C protein.
          Length = 893

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +1

Query: 118 MEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGKXEQXP 243
           M W+P+ EG  QI+ +LKESQSPD ATQ AV  K  +  + P
Sbjct: 1   MTWEPQGEGLQQIIAILKESQSPDTATQMAVQMKLEEFNRYP 42


>AE014296-1098|AAN12089.1|  893|Drosophila melanogaster CG7398-PB,
           isoform B protein.
          Length = 893

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +1

Query: 118 MEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGKXEQXP 243
           M W+P+ EG  QI+ +LKESQSPD ATQ AV  K  +  + P
Sbjct: 1   MTWEPQGEGLQQIIAILKESQSPDTATQMAVQMKLEEFNRYP 42


>AE014296-1097|AAF50674.1|  893|Drosophila melanogaster CG7398-PA,
           isoform A protein.
          Length = 893

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +1

Query: 118 MEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGKXEQXP 243
           M W+P+ EG  QI+ +LKESQSPD ATQ AV  K  +  + P
Sbjct: 1   MTWEPQGEGLQQIIAILKESQSPDTATQMAVQMKLEEFNRYP 42


>BT003191-1|AAO24946.1|  893|Drosophila melanogaster RE59670p
           protein.
          Length = 893

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 21/42 (50%), Positives = 28/42 (66%)
 Frame = +1

Query: 118 MEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGKXEQXP 243
           M W+P+ EG  QI+ +LKESQSPD AT+ AV  K  +  + P
Sbjct: 1   MTWEPQGEGLQQIIAILKESQSPDTATKMAVQMKLEEFNRYP 42


>AY118705-1|AAM50565.1|  853|Drosophila melanogaster AT21921p
           protein.
          Length = 853

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 118 MEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGK-XEQXPGLXXKXEI 267
           M W P  EG  Q+L +LK+SQSP  ATQ AV +   +      GL  K  I
Sbjct: 1   MAWTPRDEGLQQLLPILKDSQSPGKATQLAVQETENEATRSMSGLILKNNI 51


>AE014296-1100|AAF50673.2|  853|Drosophila melanogaster CG8219-PA
           protein.
          Length = 853

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 118 MEWKPEQEGFXQILTLLKESQSPDXATQRAVXQKXGK-XEQXPGLXXKXEI 267
           M W P  EG  Q+L +LK+SQSP  ATQ AV +   +      GL  K  I
Sbjct: 1   MAWTPRDEGLQQLLPILKDSQSPGKATQLAVQETENEATRSMSGLILKNNI 51


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,468,584
Number of Sequences: 53049
Number of extensions: 342810
Number of successful extensions: 514
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)