Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_C06
         (882 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                24   2.1  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    23   3.7  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 111 YENGVETRTRRIXANFNTTQRVXVTRXSYP 200
           Y+N +ET+ +    N +T  R  + +  +P
Sbjct: 37  YKNNIETKNQLSPFNIDTPNRQKILKDGFP 66


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +1

Query: 40  LRFENFWHG*SLLYRVITRFLDFIMKMEWKPEQEGFXQILTLL 168
           LRFEN + G   L   + RF++   ++ +K  Q  + +  +L+
Sbjct: 190 LRFENLFDGNKELGEQMNRFINENSELLFKELQAAYEETFSLV 232


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,635
Number of Sequences: 438
Number of extensions: 2361
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)