Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_C04
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0066 - 537729-538163                                             93   4e-19
10_07_0174 + 13815478-13815903                                         92   5e-19
03_03_0168 - 15047383-15047847,15048085-15048192,15048313-150484...    30   2.9  
02_04_0449 + 23010099-23010317,23010873-23010934,23011399-230114...    30   2.9  

>03_01_0066 - 537729-538163
          Length = 144

 Score = 92.7 bits (220), Expect = 4e-19
 Identities = 39/58 (67%), Positives = 52/58 (89%)
 Frame = +3

Query: 153 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQ 326
           IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF+THLMRR++   VRGIS+KLQ
Sbjct: 17  IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFSTHLMRRIQRGPVRGISLKLQ 74



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 25/48 (52%), Positives = 33/48 (68%)
 Frame = +1

Query: 328 EEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 471
           EEERERR ++VP+ SALE D I VD +T DML  L   ++ G+ + QP
Sbjct: 75  EEERERRMDFVPDRSALEVDDIRVDKETLDMLTSLGMADLPGV-VRQP 121


>10_07_0174 + 13815478-13815903
          Length = 141

 Score = 92.3 bits (219), Expect = 5e-19
 Identities = 39/58 (67%), Positives = 51/58 (87%)
 Frame = +3

Query: 153 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQ 326
           IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++   VRGIS+KLQ
Sbjct: 17  IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQ 74



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 23/47 (48%), Positives = 32/47 (68%)
 Frame = +1

Query: 328 EEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQ 468
           EEERERR ++VPE SALE + I VD +T +ML  L   ++ G++  Q
Sbjct: 75  EEERERRMDFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121


>03_03_0168 -
           15047383-15047847,15048085-15048192,15048313-15048464,
           15048555-15048752,15049553-15050856,15051281-15051354,
           15051458-15051492,15052853-15053015
          Length = 832

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +1

Query: 295 RKCEESLSNFSEEERERRDNYVPEVSALEHDIIEVDPDTKD-MLKMLDFNNINGLQLTQP 471
           R+  ES+ +  EEE E +DN   EV+   +   E+   +++  + + + +    +Q+TQ 
Sbjct: 121 RRLFESIQSEKEEEEEEQDNETVEVNPAANQASEIQSVSQETTVSITEVHKETVVQVTQE 180

Query: 472 AT 477
           AT
Sbjct: 181 AT 182


>02_04_0449 +
           23010099-23010317,23010873-23010934,23011399-23011450,
           23011803-23011917,23012024-23012118,23012852-23012958,
           23013042-23013156,23014159-23014203,23014324-23014392
          Length = 292

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = -1

Query: 509 INYACHHSXPWVA---GCVSCRPLILLKSSIFNISLVSGSTSMMSCSRA 372
           IN+   HS  W     GC +      +K+ +F+I LVS   S+++C  A
Sbjct: 132 INWLKSHSASWTVADFGCGNAAVSKNVKNKVFSIDLVSEDPSVIACDMA 180


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,415,837
Number of Sequences: 37544
Number of extensions: 217834
Number of successful extensions: 586
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)