Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_C04
         (899 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   115   2e-27
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    29   0.15 
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   9.6  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  115 bits (276), Expect = 2e-27
 Identities = 53/58 (91%), Positives = 56/58 (96%)
 Frame = +3

Query: 153 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQ 326
           IEKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRHSQVRGISIKLQ
Sbjct: 17  IEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQ 74



 Score = 83.4 bits (197), Expect = 8e-18
 Identities = 40/53 (75%), Positives = 45/53 (84%)
 Frame = +1

Query: 328 EEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGW 486
           EEERERRDNYVP+VSALE DIIEVDP+TK+MLK LDFNNI  +QLT P   G+
Sbjct: 75  EEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLTNPTAPGY 126


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 29.5 bits (63), Expect = 0.15
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 283 VSDTRKCEESLSNFSEEERERRDNYVPEVS 372
           +++TR C E++S F  EER RR   + +++
Sbjct: 356 INETRVCGENISTFQLEERRRRRTVIEKLN 385


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 385 DIIEVDPDTKDMLKMLDFNNINGL 456
           DI +VDPD    L  +  NNI G+
Sbjct: 636 DIEDVDPDLHRSLTWILENNITGI 659


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,004
Number of Sequences: 2352
Number of extensions: 8230
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)