Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_C03
(889 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.22
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 30 0.38
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 28 2.0
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 28 2.0
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 27 2.7
SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 3.6
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 27 3.6
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 27 4.7
SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosac... 26 6.2
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 26 8.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 8.2
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.1 bits (67), Expect = 0.22
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -2
Query: 735 SASSLMLTAXVVASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATG 556
S+SS TA +S++ IS + S PTSTS T+ S +S SS + +S S++
Sbjct: 255 SSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSS 314
Query: 555 LLLSS 541
SS
Sbjct: 315 SSFSS 319
Score = 25.8 bits (54), Expect = 8.2
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = -2
Query: 696 STAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGL----LLSSGCFC 529
ST+ IS + S PTSTS T+ S +S SS + + S+ S++ SS
Sbjct: 285 STSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTIS 344
Query: 528 FSGKVIFNTSFS*TQLPSEFTS 463
S ++SFS T S+ +S
Sbjct: 345 SSSSSPSSSSFSSTTSSSKSSS 366
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 30.3 bits (65), Expect = 0.38
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = +2
Query: 467 VNSEGSWVYEKDVLKITFPLKQ-KQPEDSKRPVAEPTETTPTNVSREEMEFTTESNV--R 637
VNS G+ E + F ++ ++ E+ K + P P S+EE E R
Sbjct: 323 VNSPGALSVEATYINQNFCVQALRETEEEKYKLPHPN---PFYNSKEESEPLAAHGYIYR 379
Query: 638 DVDVGLETAQKTNEIAKAVEATTCAVNIRDDAEFLPI 748
DVD+ LET +K ++ E N +D +++ I
Sbjct: 380 DVDLSLETDEKPVKLMVRTEVDGYVKNPANDVQYISI 416
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -2
Query: 720 MLTAXVVASTAFAI--SLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGLLL 547
++ + V A+ +F + + V+WA+ T L++++S+ T +SV +A GLLL
Sbjct: 70 IILSIVSAALSFYLDTNAVWWAIRTITHLEIVGLNILSSLKYGSTLFSWISVANAFGLLL 129
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +2
Query: 203 ESMLDTHSLWSNLANEMQHLDNMMKELSLKFPSIINEGRVEGDKYQXSIHLPGYEQKDIN 382
E + + +W+++ +MQ D ++L F I N G++ Q +I L G + ++
Sbjct: 104 EGSTNVNEVWNDITEDMQSQDFSTEDLKQLFLLIFNNGKLR-TLLQNAIVLLGQQTTNVA 162
Query: 383 VKAKN 397
K N
Sbjct: 163 SKKLN 167
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = +2
Query: 554 RPVAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQKTNEIAKAVEATTCAVNIRDDA 733
R + ++ V E+ E T + DV++ + + + N +A+ + T+ + DD
Sbjct: 118 RQTIDRKKSLERRVREEQEEKTDNEDDNDVEISTQESLENNGLAEKKDDTSSLATLEDDI 177
Query: 734 E 736
E
Sbjct: 178 E 178
>SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 635
Score = 27.1 bits (57), Expect = 3.6
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -2
Query: 699 ASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGLLLSSGC----F 532
AS +F+ S + W S+T S N+ G+ A GLL GC F
Sbjct: 343 ASVSFSRSYIDWNPEGFMFHSKTKKSSFNTSLGEFISNGIYEARKALGLLTPIGCSPKKF 402
Query: 531 CFSGKVIFNTSFS 493
FS +V FN S S
Sbjct: 403 AFS-EVPFNDSNS 414
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 27.1 bits (57), Expect = 3.6
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +2
Query: 491 YEKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQK 670
Y V ++ P Q + + +ET P+ S E F T S + + E
Sbjct: 986 YTSAVTELPDPNHQLEMSTTTHVQHPNSETIPS--STENQYFDTTSGAFEANSNTEVTVN 1043
Query: 671 TNEIAKAVEATTCAVNIRDDAEFLPI 748
+NE+++ + T + DD E LP+
Sbjct: 1044 SNEVSQPFDFDTANESDNDDDE-LPV 1068
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 115 AAVSAAPQYYHGSSHWPYHHYDPXQSL 195
A +A PQYY +P HY P Q L
Sbjct: 502 ATDAAKPQYYIPKDPYPVPHYYPQQPL 528
>SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 735 SASSLMLTAXVVASTAFAISLVFWAVSKPTSTS 637
S S+ + +A+T+F SLV A + P+STS
Sbjct: 463 SVSATPTVSMSIAATSFGSSLVLTASASPSSTS 495
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 248 EMQHLDNMMKELSLKFPSIINEGRV 322
E+++L NM+ EL KFP + GR+
Sbjct: 1509 EVEYLVNMVDELLNKFPDVNFTGRI 1533
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 8.2
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = -2
Query: 735 SASSLMLTAXVVASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATG 556
S SS ++ +++S S++ + S PTS+S S + +ISS ++ + S S+
Sbjct: 520 STSSSTPSSSIISSPM--TSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVS 577
Query: 555 LLLSS 541
+LSS
Sbjct: 578 SILSS 582
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,222,507
Number of Sequences: 5004
Number of extensions: 64626
Number of successful extensions: 210
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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