Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_C02
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0378 + 3360215-3360253,3360326-3360437,3362176-3362213,336...    29   6.6  
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564...    29   6.6  
07_03_1727 + 29068348-29068571,29069473-29069514,29069593-290698...    28   8.7  

>08_01_0378 +
           3360215-3360253,3360326-3360437,3362176-3362213,
           3363949-3363966,3364629-3364847,3364937-3366727,
           3367764-3367827,3367915-3367975,3368685-3368694
          Length = 783

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = -3

Query: 242 SHFLNFLEELPPGLGSSADRAESQHQREDEAQNTYKIHFTEIL*CRRIQNSNTISFDANA 63
           S  LN   E+P    SS +++ S H      + T K    +++   R   SN    DA  
Sbjct: 162 SEVLNLFREVPSASFSSVNKSSSNHGASRGLEPT-KTEVKDVVILERDSISNGAGKDAKD 220

Query: 62  KNDQNLK 42
            NDQ ++
Sbjct: 221 INDQEME 227


>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
            21556524-21556620,21557113-21557141,21557620-21557781,
            21557981-21558061,21558156-21558314,21558394-21558510,
            21558598-21558666,21558753-21558831,21560884-21561050,
            21561109-21561229,21561522-21561649,21562293-21562361,
            21562408-21562539,21562619-21562991,21563274-21563398,
            21563500-21563655,21563785-21564198,21564634-21564691,
            21566522-21566648,21568047-21568305,21569005-21569104,
            21569231-21569317,21569454-21569692,21569914-21569999,
            21570409-21570532,21571111-21574332
          Length = 2444

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/74 (22%), Positives = 33/74 (44%)
 Frame = -1

Query: 244  RPTFSIFLKSFHLGSGAALTAPRASTNAKTKLKIRTKFILPKFYSAGEFKIPIQYRSTRT 65
            +P   +FL      S AA  A RAS++ + +L    +    +       + P   ++ R+
Sbjct: 1379 KPQLPVFLAGHRRVSAAAAAAARASSSRRRQLGRSLRSAACRIQGLERLQAPSIEKAWRS 1438

Query: 64   LRMIKILRXSXISP 23
            LR  ++ R + + P
Sbjct: 1439 LRNTQVARKNYLRP 1452


>07_03_1727 +
           29068348-29068571,29069473-29069514,29069593-29069839,
           29069936-29070013,29070551-29070736,29070829-29071126,
           29071775-29072244
          Length = 514

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +2

Query: 179 RRGQRCSRAQVEALQEN*ESGTQRSRWINQSGSSYSRHRA 298
           +RG++ +RA+ EA +E    GT+R+R + +  +    HRA
Sbjct: 384 KRGEQMARAR-EAAREITPEGTERARVVGEEEAGPEHHRA 422


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,143,852
Number of Sequences: 37544
Number of extensions: 225659
Number of successful extensions: 468
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)