Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_B21
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0196 + 14995224-14995489,14995859-14995877,14996703-149968...    31   0.96 
03_01_0441 + 3418622-3420988                                           30   2.2  
09_02_0006 + 2913672-2913770,2913870-2914157                           29   5.1  
01_06_0498 + 29810105-29810401,29811448-29812726,29813969-298142...    29   5.1  

>07_03_0196 +
           14995224-14995489,14995859-14995877,14996703-14996839,
           14998365-14998457,15001597-15001932,15003035-15003503
          Length = 439

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = +2

Query: 245 WIGLLNNNGCKTVVGRRLWYWDXLHDAGE*RV*SGVSRCFGQDVEARSQSSLGQEKE 415
           W+G  +++G    VGR  W WD L   G+  V  G +R  G+   A + SS G + +
Sbjct: 157 WLGAGDSSGAGGGVGRERWIWDSLQ--GKNEVLRGATRS-GRKGNAENWSSQGDKDD 210


>03_01_0441 + 3418622-3420988
          Length = 788

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = -1

Query: 418 GFFLLSQRALRACFNILSEASTDTTLNPS---FTSIME 314
           GFF++ QR LR+   +LSE+  ++T   +    TSI+E
Sbjct: 326 GFFIVEQRVLRSADGLLSESQVESTWETAIAKITSILE 363


>09_02_0006 + 2913672-2913770,2913870-2914157
          Length = 128

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 629 DKQEPAXLQAFXEVAQTQLLHPLVSVLIQHMGERVPETYDGVE 501
           DK+  A L  F  + +T  LH  +S   Q   E +PE ++ ++
Sbjct: 34  DKRSTAFLSKFFPMGKTNALHGRISSFQQTRDETIPEAWEHLQ 76


>01_06_0498 +
           29810105-29810401,29811448-29812726,29813969-29814204,
           29814327-29814968
          Length = 817

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 297 CGTGIXSMMLVNEGFKVVSVDASDKMLKHAL 389
           CGTG  S+ +      VV+ DAS+  ++HA+
Sbjct: 596 CGTGQASISIAEHYDSVVATDASEGQIRHAV 626


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,500,933
Number of Sequences: 37544
Number of extensions: 455069
Number of successful extensions: 1060
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)