Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_B21
         (910 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93397-2|CAB07717.2|  505|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z93397-8|CAB07716.2|  545|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AL132904-27|CAC35854.1|  545|Caenorhabditis elegans Hypothetical...    29   4.6  
U40419-1|AAA81422.1|  283|Caenorhabditis elegans Hypothetical pr...    29   6.1  
AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ...    28   8.0  

>Z93397-2|CAB07717.2|  505|Caenorhabditis elegans Hypothetical
           protein ZC482.3 protein.
          Length = 505

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 11/47 (23%), Positives = 25/47 (53%)
 Frame = +3

Query: 492 DTQFDAVICLGNSFAHMLDEYGDQRMQKLCLSNFAKCLKXCGLLFID 632
           D  F+   C  ++ + +   + + R+  + +  F KC + CG+++ID
Sbjct: 31  DQVFNFFQCSKSAISLVCPCFNETRLNSVTIKLFPKCKEVCGIIYID 77


>Z93397-8|CAB07716.2|  545|Caenorhabditis elegans Hypothetical
           protein ZC482.2 protein.
          Length = 545

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +3

Query: 552 YGDQRMQKLCLSNFAKCLKXCGLLFID 632
           + + ++  + + +F KC + CG++FID
Sbjct: 45  FNETQLNSVTIKSFPKCKEVCGIIFID 71


>AL132904-27|CAC35854.1|  545|Caenorhabditis elegans Hypothetical
           protein ZC482.2 protein.
          Length = 545

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +3

Query: 552 YGDQRMQKLCLSNFAKCLKXCGLLFID 632
           + + ++  + + +F KC + CG++FID
Sbjct: 45  FNETQLNSVTIKSFPKCKEVCGIIFID 71


>U40419-1|AAA81422.1|  283|Caenorhabditis elegans Hypothetical
           protein C27F2.4 protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 297 CGTGIXSMMLVNEGFKVVSVDASDKMLKHA 386
           CGTG+ S ++++ G   V VD S  ML+ A
Sbjct: 62  CGTGMSSEVILDAGHMFVGVDVSRPMLEIA 91


>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
           protein Y73F8A.5 protein.
          Length = 1019

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 176 CRPAY*XFYTLGGNTSTEREWXTWSAAYNLKCVDXAPVA-LXRRDXXVLRXPERGG 12
           CRP    F++LGG    E E+ T  + +++  +D  P A    R   V+  P+  G
Sbjct: 84  CRPCNPGFFSLGGGIRYE-EFVTLPSGFSVDNMDSNPDAQFSNRQSQVVECPKEAG 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,843,632
Number of Sequences: 27780
Number of extensions: 385243
Number of successful extensions: 1070
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)