Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_B19
(856 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 132 6e-32
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 29 0.64
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 29 1.1
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 29 1.1
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 27 2.6
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 27 2.6
SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces p... 27 4.5
SPCC31H12.02c |mug73||membrane transporter |Schizosaccharomyces ... 26 7.8
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 7.8
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 26 7.8
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 26 7.8
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 132 bits (319), Expect = 6e-32
Identities = 74/194 (38%), Positives = 116/194 (59%), Gaps = 4/194 (2%)
Frame = +2
Query: 152 KFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML- 328
K+DL+ KI Q+LDRHL+FPLLEFL+ ++T+D ELLQAK ++L TNM DYV ++ L
Sbjct: 14 KYDLSQKIMQHLDRHLIFPLLEFLSLRQTHDPKELLQAKYDLLKDTNMTDYVANLWTNLH 73
Query: 329 --YPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQRDDVMKTIETMRDPKTLINHLS 502
+ +ED ++R VL EL EL++ V+ +L +++ D++ + +D + HL
Sbjct: 74 GGHTDEDMANAFAEKRRSVLQELSELEEEVQGILGVLENPDLIAALR--QDKGQNLQHL- 130
Query: 503 TNKEYEFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLXDVAN*QELFVGSL-G*LAS 679
+ Y E I +Y+ A+++Y CGNY ++ LY + EL + G AS
Sbjct: 131 -QEHYNITPERIAVLYKFAQFQYNCGNYGGASDLLY--HFRAFSKDPELNASATWGKFAS 187
Query: 680 EILVQNWDGALDDL 721
EIL +WDGA+++L
Sbjct: 188 EILTVDWDGAMEEL 201
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 29.5 bits (63), Expect = 0.64
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +2
Query: 455 TIETMRDPKTLINHLSTNKEYEFKIEMIDSMYRLAKYRYECGNY 586
T+ T+ D ++ HL+ +F + ++M++ ++YRY N+
Sbjct: 180 TVATLGDLIGMVGHLNDTSGVDFNLNEYNAMWKTSEYRYVDFNF 223
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 167 FKIGQYLDRHLVFPLLEF-LAAKETYDQSELLQAKLEILSK 286
F I +YL +L+ P LEF L A E Q + A ++ SK
Sbjct: 1218 FHISKYLSSNLLLPFLEFLLTASEAEAQIPVTDASQKVSSK 1258
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = -1
Query: 577 TFIAIFGQTIHAIDHFNFKLILLVCRKMVYKSFRIPH-----GFNCFHYIISLHESQYW 416
TF+ +G I+ D +N L +VY ++ + F+ + ++S+++SQ W
Sbjct: 83 TFLVKYGDLINIQDPYNLNKTLFSVSDLVYNGIQLDYDSYSISFDAKYVLVSVNKSQRW 141
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +2
Query: 266 KLEILSKTNMIDYVTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQRDD 445
K+ + S N I Y + +L P+E ++ RG+ + Q +++ E VL+
Sbjct: 188 KITLNSVVNSISYSSFFEELLITSYAKPKEALRTRGLAIVWNQRWKNSPESVLKARSEIT 247
Query: 446 VMK 454
V K
Sbjct: 248 VCK 250
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +2
Query: 440 DDVMKTIETMRDPKTLINHLSTNKE---YEFKIEMIDSMYRLAK 562
+DV+K + T+ PK +I L ++ +EF I+ ID ++ +K
Sbjct: 3764 NDVLKKLITILSPKVIITKLDFERDTFVHEFGIDSIDLIWLASK 3807
>SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 728
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 577 WKLCGVSIISLLLSTG*CRQLTRIICRFF 663
W++ +SI LLLS G C +I +FF
Sbjct: 667 WRITFISISGLLLSVGICVLCYKIYFKFF 695
>SPCC31H12.02c |mug73||membrane transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 306
Score = 25.8 bits (54), Expect = 7.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 690 TKISLANYPKEPTNNSC 640
T+I ++N P PT N+C
Sbjct: 290 TRIQISNLPSSPTKNNC 306
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 574 FIAIFGQTIHAIDHFNFKLILLVCRKMVYKSFRIP 470
F IFGQ I AID ++ KL + + +SF P
Sbjct: 351 FFGIFGQKIDAIDFYSAKLYKISQQIENARSFDYP 385
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +2
Query: 413 EPVLRLMQRDDVMKTIETMRDPKTLINHLSTNKEYEFKIE 532
+PV+R+ + I + + P+ L H S K+Y++ ++
Sbjct: 1947 KPVIRISHFHHTFEVISSKQRPRRLTIHGSDGKDYQYVLK 1986
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 305 VTDIRRMLYPEEDTPEEIIQRRGVVLSELQ-ELQDAVEPVL 424
VTDI+ +L + DTP ++ G + L+ +EP+L
Sbjct: 533 VTDIKEILPSQHDTPHNSVKLTGSSTTPASVSLRQMIEPLL 573
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,216,582
Number of Sequences: 5004
Number of extensions: 64276
Number of successful extensions: 183
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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