Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_B19
(856 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0836 - 6795224-6795263,6796027-6796128,6796264-6796401,679... 144 6e-35
07_01_0482 + 3627980-3628270,3628785-3629012,3629116-3629237,362... 105 6e-23
07_03_0517 + 19000050-19000427,19000539-19000766,19001142-190012... 97 2e-20
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 31 1.2
12_02_0496 + 19704429-19704613,19705874-19706736,19706764-197069... 30 2.0
07_03_1700 - 28810239-28810870,28811304-28812594 30 2.7
10_08_0523 - 18518158-18518442,18518786-18518899,18518994-185192... 29 4.7
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 8.3
03_02_0320 + 7437528-7437623,7437725-7437772,7438885-7438994,743... 28 8.3
01_01_0046 - 331758-332627 28 8.3
>07_01_0836 -
6795224-6795263,6796027-6796128,6796264-6796401,
6796790-6796932,6797388-6797607,6798087-6798208,
6798317-6798544,6798993-6799355
Length = 451
Score = 144 bits (350), Expect = 6e-35
Identities = 73/196 (37%), Positives = 124/196 (63%), Gaps = 1/196 (0%)
Frame = +2
Query: 149 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 328
++ DLT ++ +D HLVFPLLEFL + Y E+L+AKL +LS TNM+DY DI + L
Sbjct: 2 AEHDLTARMAGQMDCHLVFPLLEFLQERALYANKEILEAKLRLLSGTNMVDYAMDIHKSL 61
Query: 329 YPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 508
+ ++ P+++++RR V+S L+ L +A P++ +Q + ++ +R K H+ +
Sbjct: 62 HDTDEVPDDMVRRRTDVVSRLRALDEATAPIVSFLQNQQL---VQELRPDKQYNLHMLQD 118
Query: 509 KEYEFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLXDVAN*QELFVGSL-G*LASEI 685
+ ++ E I+++Y+ AK++++CGNY ++A YLY Q + E + +L G LA+EI
Sbjct: 119 R-FQIGPEQIETLYQFAKFQFDCGNYSDAAVYLY--QYRALCTNSERSLSALWGKLAAEI 175
Query: 686 LVQNWDGALDDLTNFE 733
L+QNWD ALD+L +
Sbjct: 176 LMQNWDVALDELNRLK 191
>07_01_0482 +
3627980-3628270,3628785-3629012,3629116-3629237,
3629747-3629966,3630434-3630576,3631004-3631141,
3631275-3631380
Length = 415
Score = 105 bits (251), Expect = 6e-23
Identities = 66/195 (33%), Positives = 106/195 (54%)
Frame = +2
Query: 149 SKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVTDIRRML 328
++ DLT ++ +LD HLV PLLEFL + Y + E+L+AK+ +L TNM+DY DI +
Sbjct: 2 AEHDLTARMAGHLDCHLVLPLLEFLQERHLYPEEEILEAKIRLLRGTNMVDYAMDIHKSR 61
Query: 329 YPEEDTPEEIIQRRGVVLSELQELQDAVEPVLRLMQRDDVMKTIETMRDPKTLINHLSTN 508
Y +D PE++++RR V+S L L +A++ + + Q IET+
Sbjct: 62 YGTDDVPEDMVKRRAEVVSRLTSLGEAIDNIHQNQQIGP--DQIETL------------- 106
Query: 509 KEYEFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLXDVAN*QELFVGSLG*LASEIL 688
Y++ AK++++CGNY +A YL+ + N + G LA+EIL
Sbjct: 107 --YQY-----------AKFQFDCGNYSFAAQYLHQYRAL-CTNIERSLSALWGKLAAEIL 152
Query: 689 VQNWDGALDDLTNFE 733
+QNWD AL++L +
Sbjct: 153 MQNWDVALEELNRLK 167
>07_03_0517 +
19000050-19000427,19000539-19000766,19001142-19001221,
19001222-19001441,19001571-19001713,19002023-19002160,
19002295-19002376
Length = 422
Score = 97.1 bits (231), Expect = 2e-20
Identities = 60/200 (30%), Positives = 112/200 (56%), Gaps = 9/200 (4%)
Frame = +2
Query: 149 SKFDLTFKIGQYLDRHLVFPLLEFLAAK--ETYDQSELLQAKLEILSK-TNMIDYVTDIR 319
++ DLT ++ +++ HLVFPLLEFL + Y E+LQAKL +L + TNM+DY D
Sbjct: 2 AEHDLTARMAAHMNCHLVFPLLEFLQWRPGRVYAVEEILQAKLRLLIQGTNMVDYAMDTH 61
Query: 320 RMLYPEED------TPEEIIQRRGVVLSELQELQDAVEPVLRLMQRDDVMKTIETMRDPK 481
++L+ + D P+++++RR V++ L L P++ ++ + P
Sbjct: 62 KLLHGDTDDDVVVPVPDDMVERRHEVVTRLGALAAPAAPIVSALKNHHL--------GPD 113
Query: 482 TLINHLSTNKEYEFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLXDVAN*QELFVGS 661
N ++ ++ + I+++Y+ AK++++CGNY ++A L+ + ++ + L
Sbjct: 114 KEHNIRMLHERFQIGPDQIEALYQYAKFQFDCGNYPDAAENLHRYRALCTSSERSL-SAQ 172
Query: 662 LG*LASEILVQNWDGALDDL 721
G L++EIL NWD AL++L
Sbjct: 173 WGKLSAEILNNNWDVALEEL 192
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 239 YDQSELLQAKLEILSKTNMIDYVTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAVEP 418
YD + + +T D D L P+EDT E ++RRGV L+E + +AV+
Sbjct: 363 YDPPQDPNVFIHRAGRTARYDQEGDAIVFLLPKEDTYVEFLKRRGVPLTERECSTNAVDI 422
Query: 419 V 421
V
Sbjct: 423 V 423
>12_02_0496 +
19704429-19704613,19705874-19706736,19706764-19706951,
19707190-19708200
Length = 748
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +3
Query: 519 SLKLK*SIACIVWPNIAMNVEIMWSQHHIFTFVNWXMSPTDKNYLSVLWGNWLAKFWYKI 698
+L L +I+ + N+ ++ ++ +HH+FTF+ DK YL VL W + W+++
Sbjct: 163 TLHLFSTISIQIGANLDLSRDVAEIKHHMFTFL------LDKRYLIVLDDVWREETWHEL 216
>07_03_1700 - 28810239-28810870,28811304-28812594
Length = 640
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +2
Query: 236 TYDQSELLQAKLEILSKTNMIDYVTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAVE 415
T+D +LL+A E+L K + Y T + +L ED +++R V++ +E + +E
Sbjct: 336 TFDLEDLLRASAEVLGKGS---YGTAYKAIL---EDGTVVVVKRLKDVVAGKKEFEQQME 389
Query: 416 PVLRLMQRDDV--MKTIETMRDPKTLINHLSTNKEYEFKIEMI 538
+ RL + ++ ++ +D K ++ TN + K+ I
Sbjct: 390 LIGRLGKHANLVPLRAYYYSKDEKLIVYDYLTNGSFSTKLHGI 432
>10_08_0523 -
18518158-18518442,18518786-18518899,18518994-18519219,
18519364-18519470,18519809-18519964,18520100-18520210
Length = 332
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 269 LEILSKTNMIDY---VTDIRRMLYPEEDTPEEIIQRRGVVLSELQELQDAVEPVL 424
+EIL ++ +++ V I ++LY ED P + + + ++ + Q Q + P+L
Sbjct: 225 VEILCQSPEVEHLPIVNAIHKVLYAAEDDPSMVAEAQAMISQQQQSEQPMLSPIL 279
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +3
Query: 72 GCWFLPTTCVSIFIRIHENKLST*VTQNLI----*RLK*DSILIGISCFLY*NS*QQRRH 239
GC LP + + F+R+ E+ LST QN+I R S+ +SC L Q H
Sbjct: 108 GCPVLPLSLIQHFLRVCEHWLSTGNNQNIILLHCERGGWPSLAFMLSCLLIFKKLQSAEH 167
Query: 240 MT 245
T
Sbjct: 168 KT 169
>03_02_0320 +
7437528-7437623,7437725-7437772,7438885-7438994,
7439651-7439735,7439839-7440115,7440296-7440454,
7440563-7440666,7440930-7441168,7441265-7441583,
7441665-7442069,7442157-7442294,7442376-7442555
Length = 719
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = -3
Query: 473 PSWFQL----FSLHHLFA*VSILALLHLEVPAVPKELHLSAV*FLQECLLQD 330
PS F+L FSL L A VS ++L H E +P+++H + L+ C+ +D
Sbjct: 367 PSVFRLRYGWFSLAELEAGVSEISLTHFENCLIPEDIHAKSP--LEACVQKD 416
>01_01_0046 - 331758-332627
Length = 289
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Frame = -3
Query: 758 PAPPLSMNSRSXLDHRARHPN-FVPKFR*--PITPKNRQI-------ILVSWRHXPVDKS 609
P PP S R +RHP+ +P R P+ P NR++ RH P K
Sbjct: 29 PPPPSSSRYRPPSPPSSRHPHPTIPAARAAPPLGPTNRRLHQQPPPPASRDGRHEPPPKP 88
Query: 608 KDMMLTPHNFHIH 570
KD+++ P + +H
Sbjct: 89 KDVVVIPTDTVLH 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,004,331
Number of Sequences: 37544
Number of extensions: 378471
Number of successful extensions: 855
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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