Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_B17
         (870 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.           31   4.1  
AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15 pr...    31   5.4  
AK126743-1|BAC86667.1|  253|Homo sapiens protein ( Homo sapiens ...    30   9.5  

>AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.
          Length = 326

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +1

Query: 361 LVRSPVPTLPLTGYLSAFLPSGSVALSHS 447
           + R PV T+P+   L AF   GSV LSHS
Sbjct: 161 IFRGPVATIPIVLLLKAFPYCGSVVLSHS 189


>AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15
           protein.
          Length = 2789

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 297 SQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRIPVRLS 416
           SQ W +  G   Y   PP K+  A  C D   +  P+ +S
Sbjct: 123 SQSWAHNMGSEDYDCIPPNKVTMAGQCKDQGNFSFPISVS 162


>AK126743-1|BAC86667.1|  253|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44789 fis, clone BRACE3038760. ).
          Length = 253

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
 Frame = -1

Query: 651 LCSTAYIPRSANPVTSGCCQWR*VVSYRVGLKTIVTG*GAAVGLNGGFVH-TAQLGANDL 475
           +CS+   P ++ P   G   WR ++++R    T V   GA +GL GG    T  LG   +
Sbjct: 118 VCSSCP-PWASLPAAPGARPWRRLLAHRAARGTRVGSLGARLGLRGGAASWTGTLGG--I 174

Query: 474 HRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEG 358
              E+     +R+ H   R +  Q  G   G  R   EG
Sbjct: 175 PFPELRALGWVRRPHTITRPR--QPWGAWAGAGRAVWEG 211


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,780,092
Number of Sequences: 237096
Number of extensions: 2999151
Number of successful extensions: 11882
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11879
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)