Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_B16
(890 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 31 0.29
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 28 1.6
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 28 1.6
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 28 2.1
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 28 2.1
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 28 2.1
SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces... 27 2.7
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 27 3.6
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 27 4.7
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 26 8.3
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 26 8.3
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = -3
Query: 714 IGFVNEVVVFLVNAILSCGFRINEAMLHLCYVNFLQHFHIHKHFRVY 574
I + + V +++A++ G + ++L C+VN H H+ R+Y
Sbjct: 917 IHVIEQTVKTVISALIRLGKDFDSSLLVSCFVNAFPHIPQHRRLRLY 963
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 769 EDIGMNAYYYYFHSHLPFWWTSEKYGALKERRGEVTST 882
+DIGM AY L F W S+++G + G +T+T
Sbjct: 118 QDIGMIAYVGTIVGQLSFGWYSDRFG---RKNGMITAT 152
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +3
Query: 21 STYRESLKILTCLLLVLETMKSVLILGWACSRRAQQCSTKTEHHKVKKCGCRYLLKSKRK 200
+++ SL ++ CL +E+ S+ +L W Q + + +VKK ++ +S+
Sbjct: 174 ASFLRSLVVIACLCTGIESDFSMALLFWDSGFHVLQLYLQGDPERVKKA---WVFQSRLL 230
Query: 201 FCPSS 215
FC +S
Sbjct: 231 FCTAS 235
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -1
Query: 278 RYHSLCQFYNIHHQ--CLVGSHLG 213
+Y++ C FYNI H C G LG
Sbjct: 35 KYYNFCPFYNIQHNYTCQTGDPLG 58
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 829 STRTVNESGSSSSKRSCQYPQ*SMSAFVLH 740
+T TV+ESGSSS+ + YP ++S H
Sbjct: 592 TTSTVSESGSSSASITSTYPSSTLSMTTSH 621
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 128 VQYQNRAP*SQKMWMPXFVEK-QKKILSFFQDVSQLNTDDEYYKIG 262
V+ +N+ ++ M M FV++ ++++ +F D S++ D+E K+G
Sbjct: 267 VESENKGLINEVMDMRNFVQQLEQELYAFEDDYSRIQNDEELLKVG 312
>SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 720
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 191 QKKILSFFQDVSQLNTDDEYYKIGKDY-DIEMNMDNYTNKKAVEEFLKMYRTGFMP 355
+ K+ D + L DD KD+ ++ +N +Y NK ++ F + + F P
Sbjct: 617 EMKLSDKIDDANSLKDDDFIQGSKKDFFEMNLNHSSYQNKDELKPFQLLVKHAFKP 672
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 628 KMQHGLINPEAAAKYGIHKENDYFVYKANYSNAVLYNNEEQRLTYF 765
++ H L + K K ND F++ + +N + N+++ +L YF
Sbjct: 528 RISHTLELQDILVKLSTPKNNDVFIFSSKITNKL--NDDQSKLWYF 571
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = +1
Query: 496 NSCMPSTSLLSSALXCHGFVVPAPYEVYPKMFMNMEVLQKIYVTKMQHG 642
N STS L SAL G+ + + + + +E K+ + HG
Sbjct: 411 NRIYASTSFLKSALESSGYKIVNKSHFFDTLTIEVESADKVLAKALDHG 459
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 225 LTSWKKDRIFFCFSTNXGIHIF*LYGARFWYCTAERDGYKPSQE 94
L+S+ F+ F T G + L+ R WY D Y+PS E
Sbjct: 186 LSSYSPFLWFYFFITIVG-NFIPLFTPRVWYPLFPEDNYQPSAE 228
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 203 LSFF--QDVSQLNTDDEYYKIGKDYDIEMNMDN 295
L+FF Q+V Q+N +DEY + + D E +DN
Sbjct: 49 LNFFSTQNVMQMNFEDEYSEFSNE-DDEAEIDN 80
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,455,124
Number of Sequences: 5004
Number of extensions: 68763
Number of successful extensions: 231
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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