Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_B14
(980 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor ... 32 1.4
M69057-3|AAA28558.1| 595|Drosophila melanogaster GABA-alpha rec... 32 1.4
M69057-2|AAA28557.1| 601|Drosophila melanogaster GABA-alpha rec... 32 1.4
M69057-1|AAA28556.1| 606|Drosophila melanogaster GABA-alpha rec... 32 1.4
AE014296-1598|AAN11989.1| 585|Drosophila melanogaster CG10537-P... 32 1.4
AE014296-1597|AAF50311.1| 606|Drosophila melanogaster CG10537-P... 32 1.4
AE014296-1596|AAN11988.1| 606|Drosophila melanogaster CG10537-P... 32 1.4
U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous pro... 31 3.2
BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p pro... 31 3.2
AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB... 31 3.2
AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA... 31 3.2
>U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor
protein.
Length = 606
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 359 PGXXXXGXPPXGGGGGXXXXXPPXXXG 439
PG G PP GGGGG PP G
Sbjct: 509 PGPGQGGGPPGGGGGGGGGGGPPEGGG 535
>M69057-3|AAA28558.1| 595|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 595
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 359 PGXXXXGXPPXGGGGGXXXXXPPXXXG 439
PG G PP GGGGG PP G
Sbjct: 498 PGPGQGGGPPGGGGGGGGGGGPPEGGG 524
>M69057-2|AAA28557.1| 601|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 601
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 359 PGXXXXGXPPXGGGGGXXXXXPPXXXG 439
PG G PP GGGGG PP G
Sbjct: 504 PGPGQGGGPPGGGGGGGGGGGPPEGGG 530
>M69057-1|AAA28556.1| 606|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 606
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 359 PGXXXXGXPPXGGGGGXXXXXPPXXXG 439
PG G PP GGGGG PP G
Sbjct: 509 PGPGQGGGPPGGGGGGGGGGGPPEGGG 535
>AE014296-1598|AAN11989.1| 585|Drosophila melanogaster CG10537-PB,
isoform B protein.
Length = 585
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 359 PGXXXXGXPPXGGGGGXXXXXPPXXXG 439
PG G PP GGGGG PP G
Sbjct: 488 PGPGQGGGPPGGGGGGGGGGGPPEGGG 514
>AE014296-1597|AAF50311.1| 606|Drosophila melanogaster CG10537-PA,
isoform A protein.
Length = 606
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 359 PGXXXXGXPPXGGGGGXXXXXPPXXXG 439
PG G PP GGGGG PP G
Sbjct: 509 PGPGQGGGPPGGGGGGGGGGGPPEGGG 535
>AE014296-1596|AAN11988.1| 606|Drosophila melanogaster CG10537-PC,
isoform C protein.
Length = 606
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 359 PGXXXXGXPPXGGGGGXXXXXPPXXXG 439
PG G PP GGGGG PP G
Sbjct: 509 PGPGQGGGPPGGGGGGGGGGGPPEGGG 535
>U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous
protein protein.
Length = 1091
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -3
Query: 438 PXXXGGXXXXXPPPPPXGGXPXFXSPGGXXPAVXNFFXXEXPPXXXPGGG 289
P GG PPPPP G P P + PP PG G
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPGMG 564
>BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p
protein.
Length = 1091
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -3
Query: 438 PXXXGGXXXXXPPPPPXGGXPXFXSPGGXXPAVXNFFXXEXPPXXXPGGG 289
P GG PPPPP G P P + PP PG G
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPGMG 564
>AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB,
isoform B protein.
Length = 1091
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -3
Query: 438 PXXXGGXXXXXPPPPPXGGXPXFXSPGGXXPAVXNFFXXEXPPXXXPGGG 289
P GG PPPPP G P P + PP PG G
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPGMG 564
>AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA,
isoform A protein.
Length = 1091
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -3
Query: 438 PXXXGGXXXXXPPPPPXGGXPXFXSPGGXXPAVXNFFXXEXPPXXXPGGG 289
P GG PPPPP G P P + PP PG G
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPGMG 564
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,452,152
Number of Sequences: 53049
Number of extensions: 621312
Number of successful extensions: 2114
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1537
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4935487923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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