Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP24_F_B11
(877 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 274 8e-75
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 164 1e-41
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 158 1e-39
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 138 1e-33
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 116 3e-27
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 115 8e-27
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 113 3e-26
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 36 0.010
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 32 0.12
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 29 0.66
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 27 4.6
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 26 6.1
SPCC285.05 |||purine nucleoside transporter |Schizosaccharomyces... 26 6.1
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 26 8.1
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 26 8.1
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 8.1
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 274 bits (673), Expect = 8e-75
Identities = 139/211 (65%), Positives = 167/211 (79%), Gaps = 1/211 (0%)
Frame = +1
Query: 76 SEXYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSV 255
++ Y+FSLTTFSP+GKLVQIEYAL AV AG TSVGIKA++GVV+ATE K S L S+
Sbjct: 2 TDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASL 61
Query: 256 NKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQ-YFLMYHEPIPTAQLVQRVATVMQEY 432
KV IT IGMVYSGMGPD+R+LV ++RK+AQ Y +Y+E PT LVQ +A+VMQE
Sbjct: 62 EKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQES 121
Query: 433 TQSGGVRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED 612
TQSGGVRPFGVSLL+ G +E P L+Q DPSG YFAWKATA+GK+ KTFLEKRY ++
Sbjct: 122 TQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDE 181
Query: 613 LELDDAVHTAILTLKEGFEGQMTADNIEVGI 705
LELDDAVHTAIL LKE FEG++T DNIE+ +
Sbjct: 182 LELDDAVHTAILALKETFEGELTEDNIEIAV 212
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 164 bits (399), Expect = 1e-41
Identities = 83/216 (38%), Positives = 129/216 (59%), Gaps = 2/216 (0%)
Frame = +1
Query: 85 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 264
Y +L+ FSP G+L+Q+EY AV G T++ ++ + +VI E K+ L + + K+
Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKI 63
Query: 265 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSG 444
M+ H+ + ++G+ D R+L+ +AR AQ + L +P+ L + VA V Q+YTQSG
Sbjct: 64 AMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSG 123
Query: 445 GVRPFGVSLLICGWEEG--RPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLE 618
GVRPFGVS LI G++ G P ++Q +P+G Y AWKATA+G+ + +LEK + E L
Sbjct: 124 GVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLS 183
Query: 619 LDDAVHTAILTLKEGFEGQMTADNIEVGICDASGSV 726
D+ +H A+ +L E Q + NIE+ I D V
Sbjct: 184 RDETIHLAVSSLLEVV--QTASGNIELAIMDPGKDV 217
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 158 bits (383), Expect = 1e-39
Identities = 82/210 (39%), Positives = 125/210 (59%), Gaps = 3/210 (1%)
Frame = +1
Query: 76 SEXYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHS 252
S Y T FSP G+L Q+EYAL A+ G ++GI A +G+V+A E K S +L E S
Sbjct: 2 SRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEES 61
Query: 253 VNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEY 432
K+ I ++ +G+ D +L+ AR++ QQY ++E +P QLV+RV + Q Y
Sbjct: 62 AEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGY 121
Query: 433 TQSGGVRPFGVSLLICGWEEGRPY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTE 609
TQ GG+RPFGVS L GW+ R Y LFQ +PSG Y +W+A ++G N + ++ + + Y +
Sbjct: 122 TQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKD 181
Query: 610 DLELDDAVHTAILTLKEGFE-GQMTADNIE 696
D+ LD+A A+ L + + +T + IE
Sbjct: 182 DINLDEASAMAVKFLSKTLDSNSLTHEKIE 211
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 138 bits (333), Expect = 1e-33
Identities = 72/225 (32%), Positives = 116/225 (51%), Gaps = 6/225 (2%)
Frame = +1
Query: 64 VIMASEXYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYD 243
+ M Y + TFSP G+L Q+EYA+ A+ G T++G+K + VV+ E + S L +
Sbjct: 1 MFMTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLME 60
Query: 244 EHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVM 423
HSV K+ I HIG SG+ D R ++ AR Q + Y EP Q + +
Sbjct: 61 SHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLA 120
Query: 424 QEYTQSGG------VRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKT 585
+ + RPFGV+LLI G +E P L+ +PSG YF ++A A+G K+
Sbjct: 121 LRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKS 180
Query: 586 FLEKRYTEDLELDDAVHTAILTLKEGFEGQMTADNIEVGICDASG 720
L K + +D+ L++A + L++ E ++ + N+++ A G
Sbjct: 181 ELVKEFHKDMTLEEAEVLILKVLRQVMEEKLDSKNVQLAKVTAEG 225
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 116 bits (280), Expect = 3e-27
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 5/211 (2%)
Frame = +1
Query: 94 SLTTFSPSGKLVQIEYALAAVA-AGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEM 270
++T FSP G+L Q+EYA A AG TSVG+ N + ++ K L D +V V
Sbjct: 10 TITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFP 69
Query: 271 ITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGV 450
IT IG V +G D R V++AR A ++ P+P L +R+A + Q TQ +
Sbjct: 70 ITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAM 129
Query: 451 RPFGVSL-LICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED---LE 618
RP GV++ L+ +E P LF+ DP+G Y +KAT+ G +LEKR+ +D
Sbjct: 130 RPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSN 189
Query: 619 LDDAVHTAILTLKEGFEGQMTADNIEVGICD 711
L D V T I L + +++G+ +
Sbjct: 190 LTDTVETGIQALMSSLSTDFKSTELQIGVVE 220
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 115 bits (277), Expect = 8e-27
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 4/216 (1%)
Frame = +1
Query: 70 MASEXYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEH 249
M Y TT+SP G+L Q+EYAL A+ G +VG+ + V+ ++ L
Sbjct: 1 MFRNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ 60
Query: 250 SVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQE 429
K+ I HIG+ +G+ PD R+L ++ A ++ PIP +L+ +VA Q
Sbjct: 61 K--KLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQI 118
Query: 430 YTQSGGVRPFGVSLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT- 606
TQ G RP+GV L+ G++E P+L + PSG + T+MG + +T++E+
Sbjct: 119 NTQEYGRRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDT 178
Query: 607 -EDLELDDAVHTAILTLKEGF--EGQMTADNIEVGI 705
D ++ + +A+ L++ + ++T +N+ + +
Sbjct: 179 FPDSSREELILSALRALRDTLSKDQELTEENVSISV 214
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 113 bits (272), Expect = 3e-26
Identities = 61/179 (34%), Positives = 91/179 (50%)
Frame = +1
Query: 106 FSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHI 285
FSP G+L Q EYA AV T +GIK +GV++A E S L N++ + HI
Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHI 73
Query: 286 GMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGV 465
G+ +G PD + +V +AR A + Y PIP + R+ +Q +T VRPFGV
Sbjct: 74 GIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGV 133
Query: 466 SLLICGWEEGRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTA 642
+ ++ P+L+ +P+G Y+ + A GK + LEK L++ DAV A
Sbjct: 134 MSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKMKDAVKEA 192
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 35.5 bits (78), Expect = 0.010
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 2/189 (1%)
Frame = +1
Query: 151 AVAAGGTSVGIKASNGVVIATENKHKS--ILYDEHSVNKVEMITGHIGMVYSGMGPDYRL 324
A + G T VG+ A + +V+ + + + I+ D++ K+ +I+ +I +G D
Sbjct: 31 ATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNC-KKLHLISPNIWCAGAGTAADTEF 89
Query: 325 LVTQARKMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGRPY 504
+ + + + L Y P ++V + + Q + G G L++ G++ P+
Sbjct: 90 VTSMISSNIELHSL-YTNRKP--RVVTALTMLKQHLFRYQG--HIGAYLVLGGYDCKGPH 144
Query: 505 LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQMTA 684
LF G+ A+G + LE +Y DLE H A+ +KE E +
Sbjct: 145 LFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLER----HEAMELVKEAIEAGIFN 200
Query: 685 DNIEVGICD 711
D CD
Sbjct: 201 DLGSGSNCD 209
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 31.9 bits (69), Expect = 0.12
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +1
Query: 238 YDEHSVNKVEMITG----HIGMVYSGMGPDYRLLVTQARKMAQQYFLMYHEPIPTAQLVQ 405
Y +H+VNK+++IT V D+ L T RK+ Y+ +Y P +L++
Sbjct: 1589 YSQHTVNKIQIITNITLDFDSFVLRTTVNDFLFLQTILRKIYNFYYALYDVPTTDVELLK 1648
Query: 406 R 408
R
Sbjct: 1649 R 1649
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 29.5 bits (63), Expect = 0.66
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 290 MPMWPVIISTLLTLCSSYSM 231
+P+WP+++S LL + SY M
Sbjct: 1508 LPLWPIVVSELLIIFKSYCM 1527
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 278 PVIISTLLTLCSSYSMLLCLFSVAITTPFDALMPTEVPPAA 156
P +++T CSS L L + P A +P + PP A
Sbjct: 265 PTLLNTYGNRCSSTDTLSSLSRLTSQDPLKASLPLQSPPLA 305
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 26.2 bits (55), Expect = 6.1
Identities = 7/30 (23%), Positives = 18/30 (60%)
Frame = -3
Query: 284 MWPVIISTLLTLCSSYSMLLCLFSVAITTP 195
+W +++ L + ++S ++C+F V + P
Sbjct: 2245 LWALLLGVLAWISRTHSWIICVFGVGLGAP 2274
>SPCC285.05 |||purine nucleoside transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 348
Score = 26.2 bits (55), Expect = 6.1
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +1
Query: 499 PYLFQCDPSGAYFAWKATAMG---KNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFE 669
P++ QCD + W T MG N N T Y + D+A TA+ + F+
Sbjct: 227 PFITQCDTATGDNYWAGTYMGDFVSNITNVLTNSTGHYCTTQQEDNASLTAL--TRASFD 284
Query: 670 GQMTADNIEV 699
G + + + +
Sbjct: 285 GLVNINRVVI 294
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 349 PSSLLESPVNDSLDPFPSKPCQCGQ 275
PS+ E ND +DP P +P G+
Sbjct: 491 PSASREKKTNDLIDPLPFQPMDWGK 515
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 25.8 bits (54), Expect = 8.1
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -3
Query: 281 WPVIISTLLTLCSSYSMLLCLFSVAITTP 195
WP+ I + T+ S+ +LC++ ++ P
Sbjct: 33 WPIRIRIINTIIISFMTMLCMYGSSVFMP 61
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 214 ENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARK 345
EN+ + + + N +E +T HI Y G G + T +RK
Sbjct: 21 ENRKEEVSTLQDMANDLEKLTDHIEATYIGRGVPHDHAKTGSRK 64
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,443,399
Number of Sequences: 5004
Number of extensions: 73144
Number of successful extensions: 198
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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