Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_B04
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0348 + 20485884-20485995,20486818-20486951,20487668-20487760    113   2e-25
01_06_1583 + 38436958-38437069,38438167-38438300,38438542-384386...    90   2e-18
10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850...    34   0.13 
03_04_0184 - 18210875-18212065                                         29   3.7  
04_04_1582 - 34590698-34591199,34593849-34594690                       29   4.9  
06_02_0351 + 15067596-15067771,15067999-15068076,15069166-15069385     28   8.6  
06_01_0028 + 282235-283209                                             28   8.6  

>05_04_0348 + 20485884-20485995,20486818-20486951,20487668-20487760
          Length = 112

 Score =  113 bits (271), Expect = 2e-25
 Identities = 46/81 (56%), Positives = 60/81 (74%)
 Frame = +3

Query: 174 PAGNAENGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGIT 353
           P GN + G+KIF  +CAQCHTV+ G  HK GPNL+G FGR++G   G+SYS ANK   + 
Sbjct: 8   PPGNPKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSTANKNMAVI 67

Query: 354 WNDDTLFEYLENPKKYIPGNQ 416
           W ++TL++YL NPKKYIPG +
Sbjct: 68  WEENTLYDYLLNPKKYIPGTK 88



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 21/32 (65%), Positives = 23/32 (71%)
 Frame = +1

Query: 391 PRNTSLXTKMVFAGLKKANERADLIAYLKSAT 486
           P+     TKMVF GLKK  ERADLI+YLK AT
Sbjct: 80  PKKYIPGTKMVFPGLKKPQERADLISYLKEAT 111


>01_06_1583 +
           38436958-38437069,38438167-38438300,38438542-38438608,
           38438900-38438937,38439302-38439391
          Length = 146

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 37/76 (48%), Positives = 51/76 (67%)
 Frame = +3

Query: 174 PAGNAENGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGIT 353
           P G+A  G+KIF  +CA CH V+    HK GPNL+G FGR++G A GFSY   +K   + 
Sbjct: 8   PPGDAAAGEKIFRTKCAYCHAVDKAAGHKHGPNLNGLFGRQSGTAPGFSYPSGDKIVPVI 67

Query: 354 WNDDTLFEYLENPKKY 401
           W ++TL++YL  PKK+
Sbjct: 68  WEENTLYDYLLTPKKH 83



 Score = 36.7 bits (81), Expect = 0.025
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +1

Query: 415 KMVFAGLKKANERADLIAYLKSAT 486
           KM F GLK+  +RADLIAYLK+AT
Sbjct: 122 KMGFNGLKQPQDRADLIAYLKNAT 145


>10_05_0043 +
           8503979-8504407,8506484-8506624,8506865-8506975,
           8507746-8508330
          Length = 421

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +1

Query: 292 EKLARLQDSHTPMPIKLRALHGMTTLSLNILRIPRNTSLXTKMVFAGLKKANERA 456
           + L RLQDS TP P+K  +      L+ N+   P  TS+ T ++ A   K  + A
Sbjct: 304 KNLERLQDSITPKPVKPPSTPNTVALAANMAPDPVTTSVTTSVIPAAQTKKKKSA 358


>03_04_0184 - 18210875-18212065
          Length = 396

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 592 AEYITDHTDWAK*EVNSRNVMENASYGIFYYFKITW*QI*DR 467
           A+ I +H  WA  E  ++N   N S G  Y +K+ W  + D+
Sbjct: 258 ADLIAEHEIWAAVEPFAKNEAFNCSNGDLYKWKLLWPMLADQ 299


>04_04_1582 - 34590698-34591199,34593849-34594690
          Length = 447

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 243 AGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGITWNDDTLFEYLENPKKYIPGN 413
           AGG  K G    G  G   G+      S+  + KGI W +D    +L   +KY  G+
Sbjct: 238 AGGGKKGGGGGGGGGGGGHGEKGSAKSSEQERRKGIAWTEDEHRLFLLGLEKYGKGD 294


>06_02_0351 + 15067596-15067771,15067999-15068076,15069166-15069385
          Length = 157

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -2

Query: 271 FG-PTLCLPPASTVWHWA 221
           FG PTLCLPP +T W  A
Sbjct: 21  FGMPTLCLPPIATYWSHA 38


>06_01_0028 + 282235-283209
          Length = 324

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 462 KVSTLICLLESSKHHLGXQGCISWDSQDIQREC 364
           K S L+ LL++  HH+  QG I +    I  EC
Sbjct: 191 KASGLLLLLKALPHHVSKQGRIPYIPASIAEEC 223


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,974,041
Number of Sequences: 37544
Number of extensions: 438748
Number of successful extensions: 1031
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)