Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_B04
         (881 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038611-8|AAB92035.1|  111|Caenorhabditis elegans Hypothetical ...   110   1e-24
Z74046-2|CAA98555.1|  123|Caenorhabditis elegans Hypothetical pr...   107   1e-23
CU457743-1|CAM36364.1|  692|Caenorhabditis elegans Hypothetical ...    29   4.4  
U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>AF038611-8|AAB92035.1|  111|Caenorhabditis elegans Hypothetical
           protein E04A4.7 protein.
          Length = 111

 Score =  110 bits (264), Expect = 1e-24
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = +3

Query: 171 VPAGNAENGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGI 350
           +PAG+ E GKK++ QRC QCH V++    K GP LHG  GR +G  +GF YS ANK KG+
Sbjct: 4   IPAGDYEKGKKVYKQRCLQCHVVDSTAT-KTGPTLHGVIGRTSGTVSGFDYSAANKNKGV 62

Query: 351 TWNDDTLFEYLENPKKYIPGNQ 416
            W  +TLFEYL NPKKYIPG +
Sbjct: 63  VWTRETLFEYLLNPKKYIPGTK 84



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/29 (65%), Positives = 23/29 (79%)
 Frame = +1

Query: 391 PRNTSLXTKMVFAGLKKANERADLIAYLK 477
           P+     TKMVFAGLKKA+ERADLI Y++
Sbjct: 76  PKKYIPGTKMVFAGLKKADERADLIKYIE 104


>Z74046-2|CAA98555.1|  123|Caenorhabditis elegans Hypothetical
           protein ZC116.2 protein.
          Length = 123

 Score =  107 bits (256), Expect = 1e-23
 Identities = 47/82 (57%), Positives = 59/82 (71%)
 Frame = +3

Query: 171 VPAGNAENGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGI 350
           +P G+ E GKKIF QRC QCH V +  + K GP L+G  GR++GQ AGF YS ANK KG+
Sbjct: 14  IPEGDNEKGKKIFKQRCEQCHVVNSL-QTKTGPTLNGVIGRQSGQVAGFDYSAANKNKGV 72

Query: 351 TWNDDTLFEYLENPKKYIPGNQ 416
            W+  TLF+YL +PKKYIPG +
Sbjct: 73  VWDRQTLFDYLADPKKYIPGTK 94



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = +1

Query: 391 PRNTSLXTKMVFAGLKKANERADLIAYLK 477
           P+     TKMVFAGLKKA+ERADLI +++
Sbjct: 86  PKKYIPGTKMVFAGLKKADERADLIKFIE 114


>CU457743-1|CAM36364.1|  692|Caenorhabditis elegans Hypothetical
           protein K09E10.1 protein.
          Length = 692

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +2

Query: 416 RWCLLDSRRQMSVLTL-LPISNLLPSNFKVIENSIRSI-FHNISG 544
           +WCL  S    ++L   L ISN L SNF V +++I+ I F N  G
Sbjct: 369 KWCLNLSNINCALLIFFLFISNFLSSNFLVNKDAIQEIKFRNTPG 413


>U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical
           protein F41C3.6 protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 452 VLTLLPISNLLPSNFKVIENSIRSIFHNISGIYFL 556
           +L  LP  N      + ++N ++SI HNI   YFL
Sbjct: 10  LLLFLPQENRYFVELRSLKNLLKSILHNIENDYFL 44


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,239,498
Number of Sequences: 27780
Number of extensions: 425440
Number of successful extensions: 1056
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)