Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_A24
         (874 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k...    28   1.5  
SPBC14F5.12c |cbh2||centromere binding protein Cbh2|Schizosaccha...    28   2.0  
SPBC32H8.01c ||SPBP22H7.10c|conserved fungal protein|Schizosacch...    27   2.6  
SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit Mts4|...    27   2.6  
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo...    26   6.1  
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|...    26   6.1  
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|...    26   8.1  
SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase |S...    26   8.1  
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple...    26   8.1  

>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
           kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 836

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +2

Query: 398 VIKQQKNIDLQEFTYHRESKQYCAIPSQIVIEVNLPLLSSTKECTLXCERTI 553
           VI Q + I L++      SK+Y  IP+   +E   PL   +K  TL  E TI
Sbjct: 144 VISQNRRIVLEKLANPNSSKEYETIPT---VENRHPLNKLSKTKTLAYEETI 192


>SPBC14F5.12c |cbh2||centromere binding protein
           Cbh2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 514

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 543 KEQSLYLISEKPAKYKLNISLPYPVNEECGNAKFDKSL 656
           +E+S YL+S K A   +N  L +    E GN  F ++L
Sbjct: 464 EEESQYLLSTKDAINAINTLLNFQEQSEDGNVLFTRTL 501


>SPBC32H8.01c ||SPBP22H7.10c|conserved fungal
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 187

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
 Frame = +2

Query: 356 FNHITDNGYTIPKYVIKQQKN-IDLQEFTYHRESKQY----CAIPSQIVIEVNLPLLSST 520
           +NH+ D G+  P  VIK   N ID  +     ESK         P +   E NL +  + 
Sbjct: 52  YNHLQDRGFATPISVIKSVTNKIDTNKLEAKDESKNVEKDATGNPQESKQEPNLEVQQTE 111

Query: 521 KE 526
           KE
Sbjct: 112 KE 113


>SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit
           Mts4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 891

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 55  RELVNNTAFXGLQKXYNIHLDVNNFRLPKSSYKGMAVPAVIR 180
           R+++  TAF GL       LD N F L  S +   A+   IR
Sbjct: 766 RQILGQTAFAGLMTVVLAMLDANTFVLDTSHWLLYAITLAIR 807


>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
            Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1826

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -2

Query: 633  YHILHLLDREERCLIYIWLVFQISNIKIVLSHXKVHSLVE 514
            Y +  +LD   RC+I I++VF IS + +V     VH L+E
Sbjct: 1316 YMLKPVLDWIRRCIISIFIVFFISFLPLV-----VHDLLE 1350


>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 578

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +2

Query: 329 KKPRKVLSEFNHITDNGYTI-PKYVIKQQKN 418
           KKP +  +EF H   NGY + PK    + +N
Sbjct: 530 KKPARYFAEFKHADLNGYLVKPKEYTMEGEN 560


>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 230

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -1

Query: 451 LSVVCKFLKIYILLLFYDIFRYGISIISYVIK-F*KYFSGFFPLIYYRF 308
           LS+    L  +  LLF+  F +  S + ++ + F  YFS  FP++++ F
Sbjct: 110 LSLFRCLLLFFFFLLFFLSFSFSFSFLFFLSQIFIVYFSS-FPILHFLF 157


>SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 345

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 478 TWYSTVLFALSVVCKFLKIYILLLFYD 398
           +WY TVL+A      FL +Y++ L YD
Sbjct: 46  SWY-TVLWAFLPFWPFLIVYLIWLIYD 71


>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
            subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1522

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = +2

Query: 260  PQHSYSDQNTEVFXXSKPVIDQWKKPRKVLSEFNHITDNGYTIPKYVIKQ 409
            P H ++++ +++   S  +I+   KPR   S  +H  +NG  + K V+K+
Sbjct: 878  PTH-FNEEESDIDSLSSSLIE---KPRASSSPIHHANNNGLRLLKDVLKK 923


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,355,922
Number of Sequences: 5004
Number of extensions: 69610
Number of successful extensions: 170
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)