Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP24_F_A04
         (887 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC071898-1|AAH71898.1|  437|Homo sapiens four jointed box 1 (Dro...    33   1.4  
BC049171-1|AAH49171.1|  437|Homo sapiens four jointed box 1 (Dro...    33   1.4  

>BC071898-1|AAH71898.1|  437|Homo sapiens four jointed box 1
           (Drosophila) protein.
          Length = 437

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -1

Query: 752 LILWITVLPPLSEXYRSPQPNDRAQRVSERGSGRAPNTQTASPRXLA 612
           L LW  +LPP +E   S  P DR  R   R  G AP  +   P  LA
Sbjct: 23  LALWGGLLPPRTELPASRPPEDRLPRRPARSGGPAPAPRFPLPPPLA 69


>BC049171-1|AAH49171.1|  437|Homo sapiens four jointed box 1
           (Drosophila) protein.
          Length = 437

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -1

Query: 752 LILWITVLPPLSEXYRSPQPNDRAQRVSERGSGRAPNTQTASPRXLA 612
           L LW  +LPP +E   S  P DR  R   R  G AP  +   P  LA
Sbjct: 23  LALWGGLLPPRTELPASRPPEDRLPRRPARSGGPAPAPRFPLPPPLA 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,475,841
Number of Sequences: 237096
Number of extensions: 1422477
Number of successful extensions: 3785
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3785
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)