Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_P22
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical pr...    44   1e-04
AL031627-2|CAA20953.1|  179|Caenorhabditis elegans Hypothetical ...    34   0.16 
Z92832-3|CAB07372.1|  333|Caenorhabditis elegans Hypothetical pr...    33   0.27 
AL031627-8|CAA20960.2|  222|Caenorhabditis elegans Hypothetical ...    33   0.27 
AF099919-5|AAC68804.1|  188|Caenorhabditis elegans Hypothetical ...    33   0.27 
U64848-13|AAY86245.1|  339|Caenorhabditis elegans Hypothetical p...    31   1.1  
Z81542-2|CAB04416.1|  228|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical pr...    30   2.5  
AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor typ...    30   2.5  
Z81531-9|CAB04323.1|  140|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch...    29   4.4  
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch...    29   4.4  
AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical ...    29   5.9  
AC006663-2|AAF39900.2|  603|Caenorhabditis elegans Hypothetical ...    29   5.9  
Z81083-2|CAB03101.3|  646|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical
           protein K02F3.5 protein.
          Length = 308

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 29/107 (27%), Positives = 51/107 (47%)
 Frame = +1

Query: 205 WQEARLRCRLEGSVLASPLDAALKSSMLSLITNKKSSCGIYTGIHALFSKGDFRSIEGVP 384
           W  A  +C   G+ LAS + + L+   +  +     +  I  G++ +  +  FR+ +G P
Sbjct: 206 WYTASEKCIGYGAHLAS-IHSRLELGFVQRLVPVNQTAWI--GVNDIQKENVFRNSDGTP 262

Query: 385 LAKIPHDWADYEPDNAGGDENCILMYPDGNFADVNCTDTFQYVCYKK 525
           +    + W   +PDN   +ENC+ +   G + D  C  T  +VC KK
Sbjct: 263 VDF--YKWGKKQPDNQEHNENCVEVDHSGQWTDKLCIITRPFVCKKK 307


>AL031627-2|CAA20953.1|  179|Caenorhabditis elegans Hypothetical
           protein Y102A5C.7 protein.
          Length = 179

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 418 EPDNAGGDENCILMYPDGNFADVNC--TDTFQYVCYK 522
           EP+N GG E C+++   G  +D  C  TD   YVC K
Sbjct: 140 EPNNVGGTEQCLVLTWTGLMSDQTCARTDYVGYVCGK 176


>Z92832-3|CAB07372.1|  333|Caenorhabditis elegans Hypothetical
           protein F31D4.4 protein.
          Length = 333

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 627 ATWSRAYMTCLAEGGYLTIINSQQEATFLKELFAKNLP 740
           A +S A   C      L IINS++EA+ ++E FA+  P
Sbjct: 41  AEFSEALEYCTQSNASLVIINSEEEASIVREFFARENP 78


>AL031627-8|CAA20960.2|  222|Caenorhabditis elegans Hypothetical
           protein Y102A5C.17 protein.
          Length = 222

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 418 EPDNAGGDENCILMYPDGNFADVNC--TDTFQYVCYK 522
           EP+N GG E C+++   G  +D  C  TD   YVC K
Sbjct: 183 EPNNVGGMEQCLVLTWTGLMSDQTCARTDYVGYVCGK 219


>AF099919-5|AAC68804.1|  188|Caenorhabditis elegans Hypothetical
           protein F40G9.10 protein.
          Length = 188

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 25/84 (29%), Positives = 36/84 (42%)
 Frame = +3

Query: 627 ATWSRAYMTCLAEGGYLTIINSQQEATFLKELFAKNLPLIWSEXXGKISLSLA*RLE*AR 806
           A ++ A+  C +EG  L  I+S  E  FL +L A    +        I L    R     
Sbjct: 69  ANFNDAHNACRSEGSELASIHSLTENQFLVQLSAAGNRVNSKTNYVMIGLIFENR----- 123

Query: 807 XMVDYXW*DITEXGYXKWSAGEPN 878
              ++ W D +   Y  W+AGEPN
Sbjct: 124 ---EWSWTDGSSVNYLNWAAGEPN 144


>U64848-13|AAY86245.1|  339|Caenorhabditis elegans Hypothetical
           protein C50E3.15 protein.
          Length = 339

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +1

Query: 391 KIPHDWADYEPDNAGGDENCILMY--PDGNFADVNCTDTFQYVCYKKKTSTVAMSSCGSV 564
           K  ++W D EP+  GG   C+ +Y  PD         D   YV + K   +  +   GSV
Sbjct: 153 KAGYNWDDGEPNGIGGRRFCLYLYIEPDIKSEMHGKVDDTAYVAFWKPNESCYLCEWGSV 212


>Z81542-2|CAB04416.1|  228|Caenorhabditis elegans Hypothetical
           protein F49A5.3 protein.
          Length = 228

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +1

Query: 400 HDWADYEPDNAGGDENCILMYPDG----NFADVNCTDTFQYVC 516
           H++A+  P+N  GD  CI     G    N+A+ +CT+T  +VC
Sbjct: 59  HNFAEDHPNNEYGD--CIYYMTTGTQAGNWANGSCTETMSFVC 99


>Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical
           protein ZK896.8 protein.
          Length = 1112

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +3

Query: 57  CSVNMKAANKSLVFVLILICSVVGQQFRYDYTYFRNINGWLKLQXDSSYLARGSIK--MS 230
           CS  ++ +  SL+ +LILI  V    FRY          W     D  ++    +K  MS
Sbjct: 493 CSYLLEISVGSLIILLILISVVFFFLFRYCENKQLEKMPWRIFHDDLQFIDEEQVKSMMS 552

Query: 231 FGRICIGFTSGRCFKKQHAV 290
            G +    ++ +  +KQHA+
Sbjct: 553 VGSVTTKLSNIQTGQKQHAI 572


>AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor type
           guanyly cyclase protein.
          Length = 1113

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +3

Query: 57  CSVNMKAANKSLVFVLILICSVVGQQFRYDYTYFRNINGWLKLQXDSSYLARGSIK--MS 230
           CS  ++ +  SL+ +LILI  V    FRY          W     D  ++    +K  MS
Sbjct: 494 CSYLLEISVGSLIILLILISVVFFFLFRYCENKQLEKMPWRIFHDDLQFIDEEQVKSMMS 553

Query: 231 FGRICIGFTSGRCFKKQHAV 290
            G +    ++ +  +KQHA+
Sbjct: 554 VGSVTTKLSNIQTGQKQHAI 573


>Z81531-9|CAB04323.1|  140|Caenorhabditis elegans Hypothetical
           protein F36D3.10 protein.
          Length = 140

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 642 AYMTCLAEGGYLTIINSQQEATFLKELFAKNLPLIW 749
           A   C+A GG LT + +  +A F++ +F  N   +W
Sbjct: 58  AERACVAVGGTLTGLQNNADALFIQRMFRFNSASVW 93


>Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical
           protein W04E12.8 protein.
          Length = 321

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
 Frame = +1

Query: 196 PAIWQEARLRCRLEGSVLASPLDAALKSSMLSLITN--KKSSCGIY-TGIHALFSKGDFR 366
           PA ++ A  +C L G  LAS  +    + + S   N  K+S+   Y  G + L + G ++
Sbjct: 40  PAQFEFAEEQCNLLGGHLASVQNGQENALLQSNAANSFKRSNYSDYWIGANDLETSGTWK 99

Query: 367 SIEGVPLAKIPHDWADYEPDNAGGDENCILMYP-DGNFADVNCTDTFQYVC 516
             +      +  D+++++        +C +    DG ++ + CT    YVC
Sbjct: 100 WTD----PSVTFDYSNWQLGEPQSGSDCAIQDKGDGTWSAIGCTSYRPYVC 146



 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/84 (23%), Positives = 35/84 (41%)
 Frame = +3

Query: 627 ATWSRAYMTCLAEGGYLTIINSQQEATFLKELFAKNLPLIWSEXXGKISLSLA*RLE*AR 806
           A W  A   C+  G +LT ++S+ E TF+  L +  +     +    I +         +
Sbjct: 202 AKWEDAEAACVLLGAHLTSVHSETENTFVANLASCGIKEGNPKDLAWIGMH--------K 253

Query: 807 XMVDYXW*DITEXGYXKWSAGEPN 878
              D+ W D T   Y  W+  +P+
Sbjct: 254 VGQDWVWTDGTPSNYINWAPKQPD 277


>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
           protein 1 protein.
          Length = 4568

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = -2

Query: 266 ASRGEANTDPSKRHLNRASCQIAGISLKLQPPVDIPEVRIVISKLLAD 123
           + RGE + D     + +   +     L LQ  +DIPE+ +V+++ + D
Sbjct: 164 SGRGERDGDKLAPTVQKCFTEAEAALLHLQQNIDIPEINLVVNQHILD 211


>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
           protein.
          Length = 4568

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = -2

Query: 266 ASRGEANTDPSKRHLNRASCQIAGISLKLQPPVDIPEVRIVISKLLAD 123
           + RGE + D     + +   +     L LQ  +DIPE+ +V+++ + D
Sbjct: 164 SGRGERDGDKLAPTVQKCFTEAEAALLHLQQNIDIPEINLVVNQHILD 211


>AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical
           protein Y102A5C.16 protein.
          Length = 200

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +1

Query: 418 EPDNAGGDENCILMYPDGNFADVNCT--DTFQYVCYKK 525
           EP+N   +E+C+LM   G  +D  CT  D   +VC K+
Sbjct: 161 EPNNGSLNEHCLLMNWQGFMSDQFCTIPDYTGWVCGKR 198


>AC006663-2|AAF39900.2|  603|Caenorhabditis elegans Hypothetical
           protein H24K24.4 protein.
          Length = 603

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 234 GRICIGFTSGRCFKKQHAV 290
           G IC+GF  GR  K QH V
Sbjct: 200 GEICVGFVGGRFSKNQHFV 218


>Z81083-2|CAB03101.3|  646|Caenorhabditis elegans Hypothetical
           protein F44F1.3 protein.
          Length = 646

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 316 CGIYTGIHALFSKGDFRSIEGVPLAKIP 399
           CG Y GIH   S   F ++ G P+  IP
Sbjct: 210 CGNYKGIHGFQSLSAFSALTGSPVLLIP 237


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,940,223
Number of Sequences: 27780
Number of extensions: 394858
Number of successful extensions: 1107
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)