Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_P19
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0875 - 23920023-23920967,23921045-23921599,23921678-239220...    36   0.057
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610...    30   2.8  
11_08_0084 + 28260647-28262575                                         29   6.5  
08_01_0998 - 10136050-10138356                                         29   6.5  
06_03_1237 + 28602250-28604196                                         29   6.5  

>12_02_0875 -
           23920023-23920967,23921045-23921599,23921678-23922083,
           23922175-23922452
          Length = 727

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 24/66 (36%), Positives = 30/66 (45%)
 Frame = +2

Query: 590 FPTVESANNLSLVEKCAKVDEMTSXYREIPRRVFHTDTRKHGGITDQVHAQRLSLPHRSA 769
           F T   A   S + K A   EM +  RE  RR  +   R HGG+      +RLS  H+S 
Sbjct: 415 FRTEPYACEPSSLPKYAPNKEMDAKLREDSRRRVNVGGRNHGGVGGGEATKRLSRGHKSM 474

Query: 770 QDRLIA 787
           QD   A
Sbjct: 475 QDTTAA 480


>01_05_0439 -
           22159425-22159520,22160137-22160345,22161028-22161066,
           22161196-22161356,22161447-22161518,22162002-22162183,
           22162580-22162703,22164196-22164299,22165526-22165725,
           22165838-22166069,22166156-22166239,22166329-22166386,
           22166724-22166771,22167924-22168081,22168451-22168501,
           22168585-22168658,22168760-22168835,22169685-22169729,
           22169833-22169899,22169978-22170095,22170580-22170775,
           22171551-22171640,22171985-22172039,22172755-22172975,
           22173362-22173454,22173608-22173721,22173918-22173981,
           22174081-22174181,22174306-22174447,22174528-22174729,
           22174883-22174976,22176172-22176348
          Length = 1248

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +2

Query: 296 IEEAKPNGALDEVF-KKYCDKSAQLKGCISSVLQGVRPCVGNDYANHINDAQNSTNQLID 472
           I+ A P+G   + F KK    + Q    +S ++Q +      DY    N+A+ +TN L+D
Sbjct: 421 IDNASPSGFNTQAFLKKRSRATNQPVESMSMIMQFIETQGFLDYLERCNNAEENTNNLLD 480


>11_08_0084 + 28260647-28262575
          Length = 642

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 668 DXRRSSHQLLRIFQQGSSYW 609
           D RRS+H+LLR  +Q SS W
Sbjct: 277 DDRRSAHELLRQIKQHSSAW 296


>08_01_0998 - 10136050-10138356
          Length = 768

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 136 GVLADDFSQITAVVTSQCTKNNAEDKVPXS*SSIAYLWKLPQGTGRF 276
           GV+  +   +TA+ T     N  E +VP S SS+  L+ L     RF
Sbjct: 298 GVIPPEIFNLTALRTIDVGTNRLEGEVPASISSLRNLYGLDLSNNRF 344


>06_03_1237 + 28602250-28604196
          Length = 648

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 243 VRNAASTXRDFVFSIVLGALRGHNRCNLTKVISQH 139
           VR+ + T    V+  +LGA R H +  + KV+++H
Sbjct: 435 VRSMSVTPHGGVWGALLGACRIHGKSEIAKVVAEH 469


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,580,265
Number of Sequences: 37544
Number of extensions: 473092
Number of successful extensions: 1277
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)