Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_P18
(950 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.23
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 1.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.7
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 3.7
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 3.7
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 3.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 4.9
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 29 4.9
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 4.9
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 4.9
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 8.5
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 28 8.5
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 8.5
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 8.5
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 8.5
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 8.5
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 521 GXXXPXPPPPRXGGXGGXSGGGXXXXPXXGGKTGXXXXG 637
G P PPPP GG G GGG GG G G
Sbjct: 107 GGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGG 145
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +2
Query: 506 GEXGXGXXXPXPPPPRXGGXGGXSGGGXXXXPXXGGKTGXXXXG 637
G G G P PPP GG GG GG GG G G
Sbjct: 46 GGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGG 89
Score = 32.7 bits (71), Expect = 0.40
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +2
Query: 506 GEXGXGXXXPXPPPPRXGGXGGXSGG-GXXXXPXXGGKTGXXXXG 637
G G G P PPP GG GG GG G GG G G
Sbjct: 103 GGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGG 147
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 506 GEXGXGXXXPXPPPPRXGGXGGXSGGGXXXXPXXGGKTGXXXXG 637
G G G PPPP G G GGG GG G G
Sbjct: 101 GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGG 144
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +2
Query: 506 GEXGXGXXXPXPPPPRXGGXGGXSGGGXXXXPXXGGKTGXXXXG 637
G G G PPPP G GG GGG GG G G
Sbjct: 44 GGGGCGGGCAPPPPPPACG-GGCGGGGGGCGGGGGGCGGGGGCG 86
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +2
Query: 506 GEXGXGXXXPXPPPPRXGGXGG--XSGGGXXXXP 601
G G G P PPPP GG GG + GG P
Sbjct: 22 GGGGGGCCAPPPPPPCGGGCGGGAPAAGGYAVAP 55
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 506 GEXGXGXXXPXPPPPRXGGXGGXSGGGXXXXPXXGGKTGXXXXG 637
G G G PP P GG GG GG GG G G
Sbjct: 64 GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGG 107
Score = 28.3 bits (60), Expect = 8.5
Identities = 28/99 (28%), Positives = 31/99 (31%), Gaps = 1/99 (1%)
Frame = -3
Query: 831 GXXGPGFXGXPRVFXGGVXXFKXXGGFXSXXWGGGFXGXXPGXGPFXXXXPRGXFWGKXX 652
G G G GG GG S GGG+ G G G G + G
Sbjct: 237 GGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGGG-----GSSGGYAGSSG 291
Query: 651 FXXFXPXXXXPVXPPXXGXXXFPPPEXPPXP-PXRGGGG 538
+ P PP PP PP P P GGG
Sbjct: 292 GGGYSAPAAAPPPPP--------PPPPPPAPAPVSSGGG 322
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 506 GEXGXGXXXPXPPPPRXGGXGGXSGGGXXXXPXXGGKTGXXXXG 637
G G G PP P GG GG GG GG G G
Sbjct: 64 GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGG 107
Score = 28.3 bits (60), Expect = 8.5
Identities = 28/99 (28%), Positives = 31/99 (31%), Gaps = 1/99 (1%)
Frame = -3
Query: 831 GXXGPGFXGXPRVFXGGVXXFKXXGGFXSXXWGGGFXGXXPGXGPFXXXXPRGXFWGKXX 652
G G G GG GG S GGG+ G G G G + G
Sbjct: 237 GGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGGG-----GSSGGYAGSSG 291
Query: 651 FXXFXPXXXXPVXPPXXGXXXFPPPEXPPXP-PXRGGGG 538
+ P PP PP PP P P GGG
Sbjct: 292 GGGYSAPAAAPPPPP--------PPPPPPAPAPVSSGGG 322
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -3
Query: 621 PVXPPXXGXXXFPPPEXPPXPPXRGGGGXGXXXPXPXSP 505
P PP +PPP PP PP R G G P P
Sbjct: 285 PRPPPPPSSGMWPPP--PPPPPGRTPGPPGMPGMPPPPP 321
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = -3
Query: 642 FXPXXXXPVXPPXXGXXXFPPPEXPPXPPXRGGGGXGXXXPXPXS 508
F P + PP +P PP PP G G P P S
Sbjct: 325 FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 369
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 515 GXGXXXPXPPPPRXGGXGG 571
G G P PPPP GG GG
Sbjct: 61 GYGAPPPPPPPPAFGGLGG 79
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 515 GXGXXXPXPPPPRXGGXGG 571
G G P PPPP GG GG
Sbjct: 61 GYGAPPPPPPPPAFGGLGG 79
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 515 GXGXXXPXPPPPRXGGXGG 571
G G P PPPP GG GG
Sbjct: 61 GYGAPPPPPPPPAFGGLGG 79
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -3
Query: 621 PVXPPXXGXXXFPPPEXPPXPPXRGGGGXGXXXPXPXSP 505
P PP +PPP PP PP R G G P P
Sbjct: 295 PRPPPPPSSGMWPPP--PPPPPGRTPGPPGMPGMPPPPP 331
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = -3
Query: 642 FXPXXXXPVXPPXXGXXXFPPPEXPPXPPXRGGGGXGXXXPXPXS 508
F P + PP +P PP PP G G P P S
Sbjct: 335 FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 379
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 636 PXXXXPVXPPXXGXXXFPPPEXPPXPPXRGGGGXGXXXPXPXSP 505
P P PP PPP PP PP G P P P
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPP--PPPPPTMSKAPTGVPLPVPPPP 1380
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 533 PXPPPPRXGGXGGXSGGGXXXXP 601
P PPP + GG GG GG P
Sbjct: 27 PTPPPSKGGGAGGGGGGEQQQVP 49
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 533 PXPPPPRXGGXGGXSGGGXXXXP 601
P PPP + GG GG GG P
Sbjct: 27 PTPPPSKGGGAGGGGGGEQQQVP 49
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 515 GXGXXXPXPPPPRXGGXGGXSG 580
G G P PPP + GG GG G
Sbjct: 266 GGGGGYPQPPPQQGGGGGGAGG 287
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 533 PXPPPPRXGGXGGXSGGGXXXXP 601
P PPP + GG GG GG P
Sbjct: 27 PTPPPSKGGGAGGGGGGEQQQVP 49
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 586 PPPGXXPXSPXSGGRGXGXPXTGP 515
PPP P +P GG G P GP
Sbjct: 63 PPPPPPPPAPIGGGAGYAAPFGGP 86
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 586 PPPGXXPXSPXSGGRGXGXPXTGP 515
PPP P +P GG G P GP
Sbjct: 63 PPPPPPPPAPIGGGAGYAAPFGGP 86
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 759 GGFXSXXWGGGFXGXXPGXGPFXXXXPRGXFWG 661
GG+ WGGG G G G RG WG
Sbjct: 41 GGWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWG 73
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 612 PPXXGXXXFPPPEXPPXPPXRGGGGXGXXXP 520
PP G PPP P PP GGG G P
Sbjct: 782 PPRGGPGAPPPPGMRP-PPGAPGGGGGMYPP 811
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 612 PPXXGXXXFPPPEXPPXPPXRGGGGXGXXXPXPXSP 505
PP G PPP P P GGGG P P
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRP 817
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.3 bits (60), Expect = 8.5
Identities = 36/169 (21%), Positives = 38/169 (22%)
Frame = +3
Query: 207 GXPPPXXXPXKXGXXGXPPXGGEXGXQXKKKXXXXGXXPQXXKXGKKPXXXKXRXXXGXX 386
G PP P G PP GG G G P + P
Sbjct: 159 GAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPS 218
Query: 387 GXXKKGKKKXXXPPPGXXXXXAXXXXXXXXXXKKRKPXXXGXXGPVXGXPXPLPPEXGEX 566
G G P G P G GP P PP G
Sbjct: 219 GAPPSGGPPGPFNPSGAPPSGG----PPGPFDPSGAPPSGGPPGPF--NPSGAPPSGGPP 272
Query: 567 GXFPGGGXXXXPXXGXKPXXXXLGXXPXKXXYPKTPPXAANXQKGRXPG 713
G F G P G P P P + G PG
Sbjct: 273 GPFDPSG---APPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPG 318
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +1
Query: 598 PPXXGXNRXXXXWGKXPKXTFTPKXPPXXXTXKRAXPRGXPXKPPPP 738
PP NR +G P P P R P G P PPPP
Sbjct: 41 PPPWHRNRGPPPFGPPPPWD-RPPPPWRRPPWHRRPPWGLPPPPPPP 86
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 612 PPXXGXXXFPPPEXPPXPPXRGGGGXGXXXPXPXSP 505
PP G PPP P P GGGG P P
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRP 817
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 612 PPXXGXXXFPPPEXPPXPPXRGGGGXGXXXP 520
PP G PPP P PP GGG G P
Sbjct: 782 PPRGGPGAPPPPGMRP-PPGAPGGGGGMYPP 811
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = -3
Query: 585 PPPEXPPXPPXRG---GGGXGXXXPXPXSP 505
P P PP PP GGG G P P P
Sbjct: 258 PGPAGPPGPPGNNGAPGGGYGVGPPGPPGP 287
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.147 0.495
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,971,153
Number of Sequences: 27780
Number of extensions: 190191
Number of successful extensions: 1384
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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