Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_P16
         (903 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1292 - 36037741-36039306                                         32   0.72 
07_03_0836 - 21856808-21858451,21858600-21859487,21860019-21860048     29   5.1  
10_08_0600 - 19098312-19099439                                         29   6.7  
06_03_0097 - 16607936-16608712,16610114-16610320,16611220-166113...    28   8.8  
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329...    28   8.8  

>01_06_1292 - 36037741-36039306
          Length = 521

 Score = 31.9 bits (69), Expect = 0.72
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +2

Query: 521 VPLKAAQINLS-PSESVQFVPIATDPITVVNVDGPAPIHSGPLTQSPKK 664
           V L   ++N + P E+  F    T P T + +D P P+  G + Q PKK
Sbjct: 255 VELTGRELNFAIPQEACDFGTWRTMPNTEIELDRPHPVMKGNVHQHPKK 303


>07_03_0836 - 21856808-21858451,21858600-21859487,21860019-21860048
          Length = 853

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 482 YLDHSVNHVSGAHVPLKAAQINLSPSESVQF-VPIATD-PITVVNVDGPAPI 631
           ++D S NH  G H  +    +N  PS   Q  +P +TD P+   NVD   P+
Sbjct: 289 WIDPSENHKKGNHAGIVQVMLN-HPSNQPQLGLPASTDSPVDFSNVDVRLPM 339


>10_08_0600 - 19098312-19099439
          Length = 375

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 473 SARYLDHSVNHVSGAHVPLKAA 538
           +AR+LDH+   ++ AH+PL AA
Sbjct: 21  AARHLDHTFEKLAAAHLPLVAA 42


>06_03_0097 - 16607936-16608712,16610114-16610320,16611220-16611336,
            16611409-16611690,16611811-16612294,16612791-16612929,
            16613138-16613243,16613396-16613562,16613632-16613707,
            16614173-16614321,16614813-16614874,16615232-16615335,
            16616856-16616950,16617046-16617136,16617785-16617922
          Length = 997

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 259  DPNIDHHRVKRCCEYEKSRKRRSPAVRAPRQVHHYEVHEFTDER 390
            D +I+HHR K+   + K R RRS +  A      Y   +  ++R
Sbjct: 912  DSSIEHHRSKKRKSHSKHRTRRSRSPYADSSDSQYTKRKHREKR 955


>02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,
            3299528-3299531,3299814-3299949,3300034-3300090,
            3301689-3301786,3301876-3301947,3302056-3302228,
            3302552-3302698,3303113-3303336,3305300-3305306,
            3305634-3305800,3306033-3306068,3306787-3307004,
            3307115-3307172,3307761-3307842,3308045-3308207,
            3308594-3308598,3308700-3308885,3308969-3309548,
            3309642-3309774,3309880-3309948,3310184-3310395,
            3310654-3310891,3311228-3311386,3311501-3311926,
            3312010-3312447,3312593-3312712,3312784-3313266,
            3313471-3314009,3314178-3314667,3314836-3314904,
            3315735-3315839,3315940-3316158,3316254-3316508,
            3316602-3316651,3317175-3317284,3317372-3317454,
            3317560-3317772,3317870-3318040
          Length = 2391

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = +3

Query: 396  SGVTSXTRKCWQQVLIIIKGTPCLQSLQDIWTIPLTTFLVPMF--RSKQPR*TY 551
            S +TS  ++   Q  +I+ GTP   ++ ++W+  L  FL+P F    KQ + TY
Sbjct: 1944 SKITSAVKQLKAQHRLILSGTPIQNNVLELWS--LFDFLMPGFLGTEKQFQATY 1995


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,345,816
Number of Sequences: 37544
Number of extensions: 401376
Number of successful extensions: 1284
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)