Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_P12
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           33   0.31 
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    30   2.9  
05_01_0244 - 1825141-1825155,1825329-1825416,1825435-1825742,182...    29   6.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.9  
06_03_1508 - 30653967-30654245,30654342-30654631,30654773-306548...    28   8.9  
04_01_0176 + 2003707-2004130,2004689-2004861                           28   8.9  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 722 RKRHASRREKGGQVSGKRQGRKQESARGSFQGETPG 615
           R R   RR  GG+V+G+   R +   RG+++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = +3

Query: 519 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF-PTL-PLTGYLSA 692
           CWR  +        T  D Q    +    +KD    P + PSC L+F P L PL   L A
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQPLHYSLYA 342

Query: 693 F 695
           F
Sbjct: 343 F 343


>05_01_0244 -
           1825141-1825155,1825329-1825416,1825435-1825742,
           1827084-1827128,1827198-1827614,1828345-1828818
          Length = 448

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -3

Query: 903 RSANPVTSAAAS-GDKXFLPGXLKTIVPDKAQRSG*TGVRAHSPAWSERPTPN*DTYSVS 727
           R+  P T+AAA+     F PG L  ++PD+    G     AH PA       N   Y+V+
Sbjct: 8   RNPPPATAAAAAPAPDQFRPGDLVEVLPDEPGYRG-----AHFPASVTASHANPRGYTVA 62

Query: 726 YE 721
           Y+
Sbjct: 63  YD 64


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 299 NESAN---ARGEAVCVLGALPLPRSLTRCAR 382
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_1508 -
           30653967-30654245,30654342-30654631,30654773-30654841,
           30654854-30654921,30655016-30655492,30655578-30655874,
           30655974-30656824,30656917-30656990,30657270-30657292,
           30657709-30657772,30658098-30658370,30658511-30658587,
           30658686-30658912
          Length = 1022

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +1

Query: 562 QKSTLKSEVAKPDRTIKIPGV-SPWKLPRALSCFRPCRLPDTCPPFSLRE 708
           Q   L+  V  P RT+   G  + +  P  L+C  PC L   CP  +L +
Sbjct: 158 QNINLQDAVNFPSRTLDCRGCCAGFFCPHGLTCMIPCPLGAYCPESTLNK 207


>04_01_0176 + 2003707-2004130,2004689-2004861
          Length = 198

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 21/56 (37%), Positives = 24/56 (42%)
 Frame = -2

Query: 814 AAVGLNGGSXTQPSLERTTYTELRYLQREL*ESATLPEGRKADRYPVSGRVGNRRA 647
           AAV LNGGS +   L  TT   L  L         +P GR A    V   +  RRA
Sbjct: 75  AAVDLNGGSSSSSRLTTTTPPPLLQLGCRQALPFIVPTGRCASLAAVVEEISGRRA 130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,641,483
Number of Sequences: 37544
Number of extensions: 519714
Number of successful extensions: 1517
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)