Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_P08
(900 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical pr... 221 7e-58
U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical pr... 96 3e-20
U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical pr... 96 3e-20
U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical pr... 96 3e-20
U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical pr... 96 3e-20
Z73423-1|CAA97776.2| 492|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical... 29 6.0
>Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical
protein W04G3.5 protein.
Length = 353
Score = 221 bits (539), Expect = 7e-58
Identities = 114/178 (64%), Positives = 135/178 (75%), Gaps = 1/178 (0%)
Frame = +3
Query: 48 PGSAKKATSYAERLRLAIAVIHGEQK-EAESDEVDGRYSPPCIPRSRTMDVSVGVPAHPA 224
PG KATSYA+RLRL +AVIHGEQK E ES DGR SPP P + D +PA +
Sbjct: 178 PGVMNKATSYADRLRLGVAVIHGEQKDEEESGLEDGRQSPP--PNVTSYDF---LPAQES 232
Query: 225 KEKPPINVVGDVGGRIAXXXXXXXXXXQSFVAAAEVLKECGAYKIYVLATHGLLSSDAPR 404
K+KPP+ VVGDVGGRIA QSFVAAAEVLK GAYKIYV+ATHG+LSSDAP
Sbjct: 233 KQKPPLTVVGDVGGRIAIMVDDIIDDAQSFVAAAEVLKARGAYKIYVIATHGVLSSDAPA 292
Query: 405 LIEDSPIDEVVVTNTVPHELQKMQCNKIKTIDISILISEAIRRIHNKESMSYLFKNVT 578
L+E SPI EV+VTNTVPH+LQKM+C+KIKT+D+S++I EAIRRI + ESM LF++VT
Sbjct: 293 LLEASPITEVIVTNTVPHDLQKMRCHKIKTVDVSLMICEAIRRIFHNESMGQLFRDVT 350
>U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical
protein R151.2c protein.
Length = 318
Score = 95.9 bits (228), Expect = 3e-20
Identities = 48/118 (40%), Positives = 69/118 (58%)
Frame = +3
Query: 222 AKEKPPINVVGDVGGRIAXXXXXXXXXXQSFVAAAEVLKECGAYKIYVLATHGLLSSDAP 401
A E + +VG V G++A + AA+ L E GA K+Y HG+ S A
Sbjct: 198 ANEVEKMTLVGSVEGKVAILVDDMADTCGTICMAADKLVEAGADKVYAFCVHGIFSGPAL 257
Query: 402 RLIEDSPIDEVVVTNTVPHELQKMQCNKIKTIDISILISEAIRRIHNKESMSYLFKNV 575
+ S + VVVTNT+P + +C+KI+ IDIS++++EAIRR HN ES+SYLF +V
Sbjct: 258 TRLNASKFEAVVVTNTIPQDENMKKCSKIQCIDISMILAEAIRRTHNGESVSYLFSHV 315
>U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical
protein R151.2b protein.
Length = 319
Score = 95.9 bits (228), Expect = 3e-20
Identities = 48/118 (40%), Positives = 69/118 (58%)
Frame = +3
Query: 222 AKEKPPINVVGDVGGRIAXXXXXXXXXXQSFVAAAEVLKECGAYKIYVLATHGLLSSDAP 401
A E + +VG V G++A + AA+ L E GA K+Y HG+ S A
Sbjct: 199 ANEVEKMTLVGSVEGKVAILVDDMADTCGTICMAADKLVEAGADKVYAFCVHGIFSGPAL 258
Query: 402 RLIEDSPIDEVVVTNTVPHELQKMQCNKIKTIDISILISEAIRRIHNKESMSYLFKNV 575
+ S + VVVTNT+P + +C+KI+ IDIS++++EAIRR HN ES+SYLF +V
Sbjct: 259 TRLNASKFEAVVVTNTIPQDENMKKCSKIQCIDISMILAEAIRRTHNGESVSYLFSHV 316
>U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical
protein R151.2a protein.
Length = 377
Score = 95.9 bits (228), Expect = 3e-20
Identities = 48/118 (40%), Positives = 69/118 (58%)
Frame = +3
Query: 222 AKEKPPINVVGDVGGRIAXXXXXXXXXXQSFVAAAEVLKECGAYKIYVLATHGLLSSDAP 401
A E + +VG V G++A + AA+ L E GA K+Y HG+ S A
Sbjct: 257 ANEVEKMTLVGSVEGKVAILVDDMADTCGTICMAADKLVEAGADKVYAFCVHGIFSGPAL 316
Query: 402 RLIEDSPIDEVVVTNTVPHELQKMQCNKIKTIDISILISEAIRRIHNKESMSYLFKNV 575
+ S + VVVTNT+P + +C+KI+ IDIS++++EAIRR HN ES+SYLF +V
Sbjct: 317 TRLNASKFEAVVVTNTIPQDENMKKCSKIQCIDISMILAEAIRRTHNGESVSYLFSHV 374
>U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical
protein R151.2d protein.
Length = 446
Score = 95.9 bits (228), Expect = 3e-20
Identities = 48/118 (40%), Positives = 69/118 (58%)
Frame = +3
Query: 222 AKEKPPINVVGDVGGRIAXXXXXXXXXXQSFVAAAEVLKECGAYKIYVLATHGLLSSDAP 401
A E + +VG V G++A + AA+ L E GA K+Y HG+ S A
Sbjct: 326 ANEVEKMTLVGSVEGKVAILVDDMADTCGTICMAADKLVEAGADKVYAFCVHGIFSGPAL 385
Query: 402 RLIEDSPIDEVVVTNTVPHELQKMQCNKIKTIDISILISEAIRRIHNKESMSYLFKNV 575
+ S + VVVTNT+P + +C+KI+ IDIS++++EAIRR HN ES+SYLF +V
Sbjct: 386 TRLNASKFEAVVVTNTIPQDENMKKCSKIQCIDISMILAEAIRRTHNGESVSYLFSHV 443
>Z73423-1|CAA97776.2| 492|Caenorhabditis elegans Hypothetical
protein C03A3.2 protein.
Length = 492
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 702 LFYFLCHYSLHSLITIMNTKTLTKNSIILV 613
++ F+CH+S+ SLIT M TK I LV
Sbjct: 249 VYAFMCHHSIPSLITPMRTKDNVFGKIALV 278
>AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical
protein Y47D3A.28 protein.
Length = 691
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 48 PGSAKKATSYAERLRLAIAVIHGEQKEAESDEVDG 152
P K A +A RLR AIA++ ++KEAE +++ G
Sbjct: 485 PLGHKDAQEHAARLR-AIAILKAKRKEAEMEKLTG 518
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,082,595
Number of Sequences: 27780
Number of extensions: 333116
Number of successful extensions: 956
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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