Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_P06
         (909 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70753-11|CAA94766.1|  244|Caenorhabditis elegans Hypothetical p...    38   0.010
AC024777-1|AAF60563.1|  133|Caenorhabditis elegans Hypothetical ...    35   0.070
AF125459-8|AAD12840.2|  317|Caenorhabditis elegans Serpentine re...    31   1.1  
Z29094-2|CAA82339.3|  590|Caenorhabditis elegans Hypothetical pr...    31   1.5  
AF125459-9|AAD12845.2|  328|Caenorhabditis elegans Serpentine re...    31   1.5  
Z93785-1|CAB07858.1|  495|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AF125459-11|AAD12842.2|  315|Caenorhabditis elegans Serpentine r...    28   8.0  

>Z70753-11|CAA94766.1|  244|Caenorhabditis elegans Hypothetical
           protein F40F9.2 protein.
          Length = 244

 Score = 37.9 bits (84), Expect = 0.010
 Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = +2

Query: 668 MTLFTSMSLMTLVNLFMQSHFLYQAHLYLGLMLMCGFVLFDTQLIIEKRR--MGSKDFVQ 841
           M LF+      +  L     FLY  +  L  +LM  ++  D QL++  R+  +  +D++ 
Sbjct: 161 MVLFSFGIFALIFTLAFNWQFLYSVYSGLAALLMMFYLAIDVQLLMGGRKYELSPEDYIF 220

Query: 842 HALELFIDLL 871
            A+E+F+D+L
Sbjct: 221 AAMEIFLDIL 230


>AC024777-1|AAF60563.1|  133|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.2 protein.
          Length = 133

 Score = 35.1 bits (77), Expect = 0.070
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +2

Query: 659 GTLMTLFTSMSLMTLVNLFMQSHFLYQAHLYLGLMLMCGFVLFDTQLIIEKRR--MGSKD 832
           G  + LF  M+ +  +  F+   FLY  +  LG +L   ++  D QLI+  RR  +  ++
Sbjct: 50  GICLMLFGLMACIFCI--FLNWQFLYIVYAVLGALLCMFYLAIDIQLIMGGRRVEISPEE 107

Query: 833 FVQHALELFIDLL 871
           ++  A  +F+D+L
Sbjct: 108 YIFAATHVFVDIL 120


>AF125459-8|AAD12840.2|  317|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 21 protein.
          Length = 317

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 565 IITALLGTTLVFVCFSAAAMLAERGSWLFLGWHIDDTVHVY 687
           I TAL   T ++  F  A +   R   LF  +HI D +HVY
Sbjct: 250 IQTALFAFTQIYFAFFTAYLPGIRSFMLFSAFHIFDLLHVY 290


>Z29094-2|CAA82339.3|  590|Caenorhabditis elegans Hypothetical
           protein C07A9.4 protein.
          Length = 590

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +2

Query: 665 LMTLFTSMSLM-TLVNLFMQSHFLYQAHLYLGLMLMCGFVLF 787
           L+ LF ++SL+ TL+ +F Q +FL + H Y  + +   F +F
Sbjct: 537 LLMLFLAISLIFTLIAMFAQKYFLRRIHSYSLVFIYISFFVF 578


>AF125459-9|AAD12845.2|  328|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 22 protein.
          Length = 328

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 571 TALLGTTLVFVCFSAAAMLAERGSWLFLGWHIDDTVHVY 687
           T L   T ++  F A  + + RG  L L +HI D +HVY
Sbjct: 252 TTLFAFTQIYFAFLATYIPSIRGYILLLAFHIFDILHVY 290


>Z93785-1|CAB07858.1|  495|Caenorhabditis elegans Hypothetical
           protein W09D10.1 protein.
          Length = 495

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -2

Query: 647 SQLPRSASIAAAEKHTNTRVVPSRAVIMIDGSTTLTYSSRGPMLMPDVNPNPSR*PSRKL 468
           SQLP+S S A  +  T    + SR     +G +T + ++  P L+   +P  S  P++K 
Sbjct: 140 SQLPKSLSQAQKKVGTPVVNIASRGSSSSNGHSTASAAAAAPSLLDFSDPPASTTPAKKA 199

Query: 467 V 465
           V
Sbjct: 200 V 200


>AF125459-11|AAD12842.2|  315|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 24 protein.
          Length = 315

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 571 TALLGTTLVFVCFSAAAMLAERGSWLFLGWHIDDTVHVY 687
           T L   T ++  F A ++ + R   L + +HI D  HVY
Sbjct: 252 TTLFAFTQIYFAFLATSIPSIRAMMLSIAFHIFDVQHVY 290


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,458,450
Number of Sequences: 27780
Number of extensions: 411004
Number of successful extensions: 1030
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)