Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_O18
(911 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 139 6e-34
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 92 1e-19
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 79 9e-16
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 78 2e-15
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 71 3e-13
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 68 2e-12
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 59 7e-10
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 58 1e-09
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 37 0.003
SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|... 28 1.6
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 26 6.5
SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 8.5
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 139 bits (336), Expect = 6e-34
Identities = 61/93 (65%), Positives = 81/93 (87%)
Frame = +3
Query: 183 DEYGRPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVT 362
D+ G PFI++RDQ++++RL G DA+KSHI A + +A+ +RTSLGPRGLDK+++S DG++T
Sbjct: 12 DDQGNPFILVRDQEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEIT 71
Query: 363 VTNDGATILKMMDVEHQIGKLLVQLAQSQDDEI 461
VTNDGATIL M+VEHQI KLLVQL++SQDDEI
Sbjct: 72 VTNDGATILDQMEVEHQIAKLLVQLSKSQDDEI 104
Score = 138 bits (335), Expect = 8e-34
Identities = 70/125 (56%), Positives = 87/125 (69%)
Frame = +1
Query: 478 GVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTRENLIK 657
GVVVLAGALLEQA L+DKGIHPIRIADGYE A +A+ HLD++S+ + NL +
Sbjct: 110 GVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAISDVVDFSPENTTNLFR 169
Query: 658 VAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFELIKVEGKVGGRMEDSVLVRG 837
A T+LGSKVV K H A I + +DV+FELIKV+GKVGG ++D+ LV+G
Sbjct: 170 SAKTSLGSKVVSKAHDHFANIAVDAVLSVADLQRKDVDFELIKVDGKVGGSVDDTKLVKG 229
Query: 838 VVVDK 852
VVVDK
Sbjct: 230 VVVDK 234
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 91.9 bits (218), Expect = 1e-19
Identities = 41/77 (53%), Positives = 58/77 (75%)
Frame = +3
Query: 231 KRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEH 410
++++G D ++ A IA+ +++SLGP GLDK++V GDVTVTNDGATIL ++DVEH
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 411 QIGKLLVQLAQSQDDEI 461
GK+LV+LAQ QD E+
Sbjct: 75 PAGKVLVELAQQQDKEV 91
Score = 46.4 bits (105), Expect = 6e-06
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = +1
Query: 481 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTRENLIKV 660
VV++A LL +A+ L+ IHP I GY +A A+ + V V+ +E+LI V
Sbjct: 98 VVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSC-SVDSLGKESLINV 156
Query: 661 AMTTLGSKVV 690
A T++ SK++
Sbjct: 157 AKTSMSSKII 166
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 79.0 bits (186), Expect = 9e-16
Identities = 37/88 (42%), Positives = 57/88 (64%)
Frame = +3
Query: 198 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDG 377
P I+L++ + G + S+I A + T+RT+LGP G DKLMV G+V ++NDG
Sbjct: 9 PVIVLKEGTDDSQ--GRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 378 ATILKMMDVEHQIGKLLVQLAQSQDDEI 461
ATI+K++D+ H K LV +A++QD E+
Sbjct: 67 ATIMKLLDIVHPAAKTLVDIARAQDAEV 94
Score = 54.4 bits (125), Expect = 2e-08
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Frame = +1
Query: 481 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNK--NTRENLI 654
VVV AG LL +A ++ G+ I GY AA LA+ + ++ ++ R+ L
Sbjct: 101 VVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLT 160
Query: 655 KVAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFELIKVEGKVGGRMEDSVLVR 834
K A T + SK++ ++ + D+N +I ++ GG MEDS+LV+
Sbjct: 161 KCASTAMNSKLIRSNSTFFTKM---VVDAVLTLDQEDLNENMIGIKKVPGGAMEDSLLVK 217
Query: 835 GVVVDK 852
GV K
Sbjct: 218 GVAFKK 223
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 77.8 bits (183), Expect = 2e-15
Identities = 39/80 (48%), Positives = 55/80 (68%)
Frame = +3
Query: 219 QDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMM 398
QDR+K + S+I AAR +A +RTSLGP+G+DK++ + G+V +TNDGATILK +
Sbjct: 12 QDREKP---QEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHL 68
Query: 399 DVEHQIGKLLVQLAQSQDDE 458
V H K+LV L+ +QD E
Sbjct: 69 SVLHPAAKMLVDLSAAQDVE 88
Score = 66.5 bits (155), Expect = 5e-12
Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Frame = +1
Query: 481 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSE-AFPVNKNTRENLIK 657
VV+LAG++L A LL KGIHP IA+ ++ AA +D + E A + + RE+L++
Sbjct: 96 VVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFT---VDCMKENALAIELSDRESLLR 152
Query: 658 VAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXE-TRDVNFELIKVEGKVGGRMEDSVLVR 834
A T+L SK+V + L+A I +V+ + I++ K+GG ++D+ L+
Sbjct: 153 AATTSLNSKIVSQYSNLLAPIAVDAVLKVIDPRVATNVDLKDIRIVKKLGGIIDDTELIP 212
Query: 835 GVVV 846
G+ +
Sbjct: 213 GLAL 216
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 70.5 bits (165), Expect = 3e-13
Identities = 32/76 (42%), Positives = 51/76 (67%)
Frame = +3
Query: 234 RLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQ 413
R G A S+IQAA+ +A +RT LGPR + K+++ G V +TNDG IL+ ++V H
Sbjct: 14 RQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHP 73
Query: 414 IGKLLVQLAQSQDDEI 461
K +++LA++QD+E+
Sbjct: 74 AAKSMIELARTQDEEV 89
Score = 59.3 bits (137), Expect = 7e-10
Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Frame = +1
Query: 481 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTRENLIKV 660
V++LAG +L AS LLD+ IHP+ + ++ A AL+ +D ++ PVN + + ++
Sbjct: 96 VIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEIT--LPVNVDDNAEMFRL 153
Query: 661 AMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFEL---IKVEGKVGGRMEDSVLV 831
T +G+K+V + LM + + ++ +VE GG +E S ++
Sbjct: 154 IRTCIGTKLVARWSDLMCHLALRAVRTVASTSNGRMEIDIKRYARVEKVPGGEIESSCVL 213
Query: 832 RGVVVDK 852
GV+++K
Sbjct: 214 DGVMLNK 220
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 67.7 bits (158), Expect = 2e-12
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +3
Query: 198 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVS-SDGDVTVTND 374
P I + Q+R G +A S A + ++++LGP+G+DK++ S S GD+ VTND
Sbjct: 5 PHQIFNESGIQER--GENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTND 62
Query: 375 GATILKMMDVEHQIGKLLVQLAQSQDDEI 461
GATILK + +++ K+LV +++ QDDE+
Sbjct: 63 GATILKSIALDNAAAKVLVNISKVQDDEV 91
Score = 53.6 bits (123), Expect = 4e-08
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Frame = +1
Query: 427 LCNWLKVKMTKLVMVPQGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHL-- 600
L N KV+ ++ V V A LL QA +++ IHP I DGY +A A+ L
Sbjct: 80 LVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALRA 139
Query: 601 DSVSEAFPVNKNTRENLIKVAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFEL 780
S+ + K R +L +A TTL SK++ + A++ D N ++
Sbjct: 140 SSIDNSSDPAK-FRSDLENIARTTLSSKILSQNKNHFAQLAVDAVLRLKGSTNLD-NIQI 197
Query: 781 IKVEGKVGGRMEDSVLVRGVVVDK 852
IK+ +GG+++DS L G +++K
Sbjct: 198 IKI---LGGKLDDSFLDEGFILNK 218
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 59.3 bits (137), Expect = 7e-10
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +3
Query: 249 DAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLL 428
DA+ + A R+++ RTSLGP G +K++V+ +TND ATI++ ++V H KL+
Sbjct: 26 DAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLV 85
Query: 429 VQLAQSQDDEI 461
V Q Q++E+
Sbjct: 86 VDATQQQENEL 96
Score = 49.2 bits (112), Expect = 8e-07
Identities = 32/121 (26%), Positives = 57/121 (47%)
Frame = +1
Query: 481 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTRENLIKV 660
VVV G LL +A N++ G+ P+ IA GYEMA + + L+ + + + LIK
Sbjct: 103 VVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICADKIETVESEKELIKA 162
Query: 661 AMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFELIKVEGKVGGRMEDSVLVRGV 840
T + SK ++++ + N + I+V +G + +S +V+G+
Sbjct: 163 IRTCISSKQYGN-EDFLSDLVAKAILTVLPKDPSKFNVDNIRVVKIMGSSLYNSQVVKGM 221
Query: 841 V 843
V
Sbjct: 222 V 222
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 58.4 bits (135), Expect = 1e-09
Identities = 37/123 (30%), Positives = 63/123 (51%)
Frame = +1
Query: 481 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTRENLIKV 660
V +L G LL+QA + +G+HP I+DG+ +A ALT LDS F V+ RE L+ V
Sbjct: 93 VCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFEVD---REVLLNV 149
Query: 661 AMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFELIKVEGKVGGRMEDSVLVRGV 840
A T+L +K+ K +A + ++ ++++ D+ L+RG+
Sbjct: 150 AKTSLSTKISSKVVESLAPAVVDAILTIRRPD-EPIDLHMVEIMKMQNRSASDTQLIRGL 208
Query: 841 VVD 849
++D
Sbjct: 209 LLD 211
Score = 48.4 bits (110), Expect = 1e-06
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +3
Query: 252 AIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLV 431
A++ +I AA + L+++LGP G K++V G + +T DG +L M +++ +
Sbjct: 17 ALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIA 76
Query: 432 QLAQSQDD 455
+ A +QDD
Sbjct: 77 KAATAQDD 84
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 37.1 bits (82), Expect = 0.003
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 243 GTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATI---LKMMDVEHQ 413
G DA S + +A + +LGP+G + L+ G +T DG T+ + + D
Sbjct: 40 GVDARASLLTGVDTLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFEN 99
Query: 414 IGKLLVQLAQSQDDEI 461
+G LVQ S+ +E+
Sbjct: 100 LGARLVQDVASKTNEV 115
>SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 405
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 309 LGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLL 428
L GLD MVS DGDVT+ DG +L V ++ +LL
Sbjct: 136 LADNGLD--MVSFDGDVTLYEDGQPLLPDNPVISRLIQLL 173
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 302 AKSACNLSGCLYM*LYGIGTGKSFLSVLVP 213
+ S +L C Y + GIG K F S++VP
Sbjct: 350 SSSVVDLHYCPYEDILGIGHAKGFESIIVP 379
>SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 828 KNRIFHASSNFPLHLNQLEIH 766
K++ +H SS F LH+ + E H
Sbjct: 492 KHKYWHLSSGFHLHITRFEAH 512
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,443,751
Number of Sequences: 5004
Number of extensions: 68693
Number of successful extensions: 188
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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