Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_O15
         (921 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0142 - 940421-940701,941262-941574                               31   1.7  
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319...    29   5.2  
07_01_0080 + 587674-588510                                             28   9.1  
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344...    28   9.1  
03_05_0825 - 27986393-27986767,27987541-27987625,27987936-279880...    28   9.1  
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542...    28   9.1  
02_05_0686 - 30900748-30902167,30903442-30904742                       28   9.1  

>05_01_0142 - 940421-940701,941262-941574
          Length = 197

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -2

Query: 614 GXPPXPRXFXXX-GAXXPPPXGXPPPP 537
           G PP P  +    GA  PPP   PPPP
Sbjct: 39  GYPPPPGAYPPPPGAYPPPPGAYPPPP 65


>01_05_0679 +
           24230740-24230929,24231330-24231461,24231710-24231977,
           24232170-24232388,24233538-24233673,24233899-24234147,
           24234783-24235100
          Length = 503

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +1

Query: 190 INTLAESAKKTIEELR--EKVESALAPETVKKNFGTMVDSFNEFYKNLKPAE 339
           ++   E A+K  E L+  +K   +L PE +K+ F +++ +F +F   L+P E
Sbjct: 254 VHATLEEARKFNEALQRWDKNAVSLVPEGLKRFFLSIMSNFRDFEDELEPHE 305


>07_01_0080 + 587674-588510
          Length = 278

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 608 PPXPRXFXXXGAXXPPPXGXPPPP 537
           PP P      G+  PPP   PPPP
Sbjct: 92  PPPPPPPPSSGSPPPPPPPPPPPP 115


>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
            29334956-29335045,29335120-29335155,29335222-29336553,
            29337331-29337497,29337519-29337724,29337815-29338036,
            29338332-29338381,29338754-29338870,29339471-29339551,
            29339656-29339694,29340464-29340636,29340769-29340826,
            29340934-29340987,29341066-29341613,29341695-29341755,
            29342180-29342260,29342448-29342630,29342908-29343162,
            29343304-29343423,29343497-29344901,29344988-29345085,
            29345164-29345218,29345307-29345366,29346498-29346697
          Length = 2077

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -2

Query: 608  PPXPRXFXXXGAXXPPPXGXPPPP 537
            PP P      G   PPP   PPPP
Sbjct: 1932 PPPPPPPPVEGKPKPPPHAPPPPP 1955


>03_05_0825 -
           27986393-27986767,27987541-27987625,27987936-27988036,
           27988144-27988227,27988868-27988939,27989203-27989319,
           27989386-27989526,27989951-27990122,27990324-27990372,
           27990773-27990821,27991240-27991270,27991301-27991371
          Length = 448

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +1

Query: 172 PKEDNSINTLAESAKKTIEELREKVE 249
           PKE ++  T+A + +KT EE+R +++
Sbjct: 91  PKESSTATTMAAATEKTAEEIRRELQ 116


>03_02_0071 +
           5425722-5427154,5427259-5427464,5428445-5428686,
           5428788-5429570
          Length = 887

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -2

Query: 605 PXPRXFXXXGAXXPPPXGXPPPP 537
           P PR      A  PPP   PPPP
Sbjct: 338 PSPRPVQPSNAPPPPPPPPPPPP 360


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = -2

Query: 632 PXXKXGGXPPXPRXFXXXGAXXPPPXGXPPPP 537
           P  K     P P          PPP G PPPP
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPP 348


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,125,921
Number of Sequences: 37544
Number of extensions: 387792
Number of successful extensions: 2462
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2072
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)