Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_O14
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1025 + 23365590-23365698,23366288-23366425,23366491-233666...    52   8e-07
07_03_1591 + 27967065-27967090,27967236-27968054,27984940-279850...    31   1.6  
06_03_1282 - 28946363-28946533,28947234-28947272,28947399-289475...    30   2.1  
03_06_0285 + 32848085-32848988,32849057-32849245,32850136-328503...    29   3.7  
03_02_0685 + 10401281-10401463,10403296-10403700                       29   3.7  
04_04_0959 + 29692740-29693035,29693102-29693267,29693433-296936...    29   4.9  

>07_03_1025 +
           23365590-23365698,23366288-23366425,23366491-23366649,
           23366768-23366809,23366885-23366930,23367027-23367147
          Length = 204

 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
 Frame = +2

Query: 143 KALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRIALYMSTE--NEIDTAPL 316
           K  LR+E+   + ALT E++  + Q +   ++N SW+K S R+  Y+S     E+DT+ +
Sbjct: 14  KRALRSEVRRALRALTPEQRASEDQAIQNAILNSSWFKESKRLCAYISCAQLREVDTSKV 73

Query: 317 IKHI----QARGAA--AFVPQY--AGGRMRMLHLETGDEQTMPKTKHGISQ----HGKDQ 460
           +  +       G A   +VP+       MRML + T D+  + K    I +         
Sbjct: 74  LSEVLSPNSEHGHAKDLYVPRVEDKNRNMRMLKITTMDD--LVKNSMNILEPSPLDASGN 131

Query: 461 ARDDALETAPGGGVFSXPETGWD 529
           AR++ L T+    +F  P   +D
Sbjct: 132 AREEVLSTSSPVDLFLLPGQAFD 154


>07_03_1591 + 27967065-27967090,27967236-27968054,27984940-27985022,
            27985590-27985744,27985956-27986461,27986551-27986703,
            27987146-27987485,27987558-27987822,27987897-27988634,
            27989734-27989779,27989849-27990223,27991511-27991567,
            27991640-27992438
          Length = 1453

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +1

Query: 439  ISAW-ERPSQGRCSRNSSRGWRFLXSGDRLGHGGG 540
            I  W E P  G CS  S  GW  +  G  +G GGG
Sbjct: 1010 IDEWAEGPVGGECSMRSEEGWLGVGGGVGVGVGGG 1044


>06_03_1282 -
           28946363-28946533,28947234-28947272,28947399-28947566,
           28947605-28947697,28948135-28948215,28948409-28948499,
           28948657-28948728,28948803-28948903,28949283-28949381,
           28949631-28949954
          Length = 412

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = +2

Query: 47  CSISFGVDI---KWLSPCYLVQLGGRMSPIKPNPAKALLRNEIAAKI 178
           C++  G  +   +  +PCYLV      S   P PA+    +EIAA+I
Sbjct: 23  CAVGIGAYLYTPQHYTPCYLVSSNSCSSRPPPEPARVYTDDEIAARI 69


>03_06_0285 +
           32848085-32848988,32849057-32849245,32850136-32850311,
           32850569-32851141
          Length = 613

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/65 (29%), Positives = 33/65 (50%)
 Frame = +2

Query: 110 GRMSPIKPNPAKALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSSRIALYMST 289
           G +   KP  A A L++   A  A    E+K+   +IV    ++ SW +   R+A+ +  
Sbjct: 243 GGVEGAKPPDAHAFLQH--VATFAVAEKEDKELYRRIV----VSFSWRRQMPRLAITLGL 296

Query: 290 ENEID 304
           E+E+D
Sbjct: 297 EDEMD 301


>03_02_0685 + 10401281-10401463,10403296-10403700
          Length = 195

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +2

Query: 113 RMSPIKPNPAKALLRNEIAAKIAALTNEEKKRQSQIVYEKVINHSWYKSSS---RIALYM 283
           R+     +    LLRN++ A +A L  ++    S  +Y  V    WY+      R  LYM
Sbjct: 26  RLEQFMRSHVSRLLRNDLLAVLAELLRQDHVLLSMKIYSVVRKEIWYRPDMYFYRDMLYM 85

Query: 284 STENE 298
              N+
Sbjct: 86  LARNK 90


>04_04_0959 +
           29692740-29693035,29693102-29693267,29693433-29693612,
           29693703-29693771,29693888-29694088,29694187-29694240,
           29694325-29694386,29694488-29694620,29694789-29694899,
           29695008-29695104,29695638-29695714,29696129-29696194,
           29696431-29696583,29697392-29697447,29697524-29697584,
           29697656-29697766,29698010-29698144,29698217-29698447,
           29699001-29699075,29699161-29699282,29699381-29699453,
           29699538-29699642,29699728-29699895,29700079-29700148,
           29700224-29700375,29700574-29700651,29700744-29700836,
           29700961-29701098,29701237-29701276,29701350-29701423,
           29701777-29701911,29702345-29702464,29702778-29702939
          Length = 1287

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = +1

Query: 454 RPSQGRCSRNSSRGWRFLXSGDRLGHGGGY 543
           R S  RC R S R WR   SG  LG  GG+
Sbjct: 74  RRSHRRCRRRSPRLWRRSGSGFLLGWFGGF 103


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,532,569
Number of Sequences: 37544
Number of extensions: 516260
Number of successful extensions: 1390
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)