Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_O01
         (1082 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.                  31   5.5  
M74027-1|AAA59875.1|  573|Homo sapiens mucin protein.                  31   5.5  
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.                  31   5.5  

>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
          Length = 1270

 Score = 31.5 bits (68), Expect = 5.5
 Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
 Frame = +3

Query: 582  TXXPXXXTTPXPPQXTXLXPXXTXXXE-GXXXYXTHXPTHXPXXPXXPPXQXPXXST--P 752
            T  P   TTP PP  T   P  T           T  PT  P  P   P   P  +T  P
Sbjct: 952  TPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP 1011

Query: 753  XSXXPXXSPT 782
             +  P   PT
Sbjct: 1012 PTTTPSPPPT 1021


>M74027-1|AAA59875.1|  573|Homo sapiens mucin protein.
          Length = 573

 Score = 31.5 bits (68), Expect = 5.5
 Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
 Frame = +3

Query: 582 TXXPXXXTTPXPPQXTXLXPXXTXXXE-GXXXYXTHXPTHXPXXPXXPPXQXPXXST--P 752
           T  P   TTP PP  T   P  T           T  PT  P  P   P   P  +T  P
Sbjct: 235 TPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP 294

Query: 753 XSXXPXXSPT 782
            +  P   PT
Sbjct: 295 PTTTPSPPPT 304


>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
          Length = 5179

 Score = 31.5 bits (68), Expect = 5.5
 Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
 Frame = +3

Query: 582  TXXPXXXTTPXPPQXTXLXPXXTXXXE-GXXXYXTHXPTHXPXXPXXPPXQXPXXST--P 752
            T  P   TTP PP  T   P  T           T  PT  P  P   P   P  +T  P
Sbjct: 1577 TPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP 1636

Query: 753  XSXXPXXSPT 782
             +  P   PT
Sbjct: 1637 PTTTPSPPPT 1646


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.135    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,102,603
Number of Sequences: 237096
Number of extensions: 602614
Number of successful extensions: 1051
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14871214694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)