Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_N23
         (982 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0178 - 14941342-14941391,14941909-14942002,14942498-149427...    29   5.7  
11_04_0009 - 12132781-12133272                                         28   9.9  

>12_02_0178 -
           14941342-14941391,14941909-14942002,14942498-14942716,
           14943409-14943492,14943783-14944067,14944349-14944501,
           14944618-14944740,14945429-14945495,14946122-14946309,
           14947134-14947250,14947720-14947812,14948377-14948459,
           14948565-14948610
          Length = 533

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 249 IKNHLQFS*RSSTWAREQRWSFSKPAPERRRR 154
           I++H     R + W    RW FS P P  R R
Sbjct: 147 IRSHRDLPLRCNQWCNVVRWEFSNPTPFIRSR 178


>11_04_0009 - 12132781-12133272
          Length = 163

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 222 RSSTWAREQRWSFSKPAPERRRRIGSLR 139
           R   W RE+R S  +  P +RRR+G  R
Sbjct: 108 RGEAWRRERRDSKIESRPSQRRRVGGRR 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,122,476
Number of Sequences: 37544
Number of extensions: 175720
Number of successful extensions: 347
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 347
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)