Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP23_F_N18
         (894 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.6  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   5.0  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   5.0  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   6.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 824 CVRRRKHIRAELSKMVGRRXFTV 892
           C++ R+HIR EL +      F V
Sbjct: 9   CIQERRHIRRELLRWTKNMVFVV 31


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 10/33 (30%), Positives = 11/33 (33%)
 Frame = +3

Query: 723 CSGDTKTPKCTKKCESGYDVXYKQDKQYGKHVY 821
           CSGD    KC   C S           + K  Y
Sbjct: 60  CSGDISVTKCEGFCNSQVQPSVASTTGFSKECY 92


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 10/33 (30%), Positives = 11/33 (33%)
 Frame = +3

Query: 723 CSGDTKTPKCTKKCESGYDVXYKQDKQYGKHVY 821
           CSGD    KC   C S           + K  Y
Sbjct: 60  CSGDISVTKCEGFCNSQVQPSVASTTGFSKECY 92


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +3

Query: 789 KQDKQYGKHVYTVSGDENTSAPNCQKW 869
           K   Q  K +  V GDE      CQ W
Sbjct: 20  KNASQAHKKLCAVYGDEALKERQCQNW 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,035
Number of Sequences: 438
Number of extensions: 5458
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)