Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP23_F_N17
(901 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0951 - 21769342-21769752 102 4e-22
02_02_0470 - 10700092-10700505 101 1e-21
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 35 0.10
01_01_0538 - 3938389-3939727,3939828-3940203,3940299-3940516,394... 30 2.2
09_01_0103 - 1628763-1628879,1641827-1642921,1645126-1645476,164... 30 2.9
01_01_0249 + 2047793-2048561,2049861-2049896,2050068-2051012,205... 30 2.9
11_05_0008 - 18335815-18336080,18340549-18340923,18342570-18342669 29 3.8
04_03_0540 + 16929782-16929834,16929937-16930032,16930111-169301... 29 3.8
01_06_1350 + 36505926-36505978,36506081-36506176,36506255-365063... 29 3.8
10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,826... 29 5.0
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 29 5.0
08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 29 5.0
10_02_0059 + 4785858-4786988 29 6.7
09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555 29 6.7
09_02_0555 - 10588685-10592038 29 6.7
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 29 6.7
04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379... 29 6.7
03_02_1029 - 13488535-13493037 29 6.7
01_01_0235 - 1964981-1964997,1965545-1966325 29 6.7
04_04_1192 + 31611804-31612113,31612235-31614058,31614098-316148... 28 8.8
>10_08_0951 - 21769342-21769752
Length = 136
Score = 102 bits (244), Expect = 4e-22
Identities = 45/101 (44%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Frame = +1
Query: 199 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS 378
+PYGH VAG+ +YP+KV ++ K K+S++K F+K+VN+ HLMPTRYT+D ++ +
Sbjct: 36 RPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRVKCFLKLVNFTHLMPTRYTLDVDLKEVA 95
Query: 379 AKDLKDPAKRKKLRF--NTRVRFEERYKSGKNKWFFQKLRF 495
A + KK+ + + R E+R+K+GKN+WFF KLRF
Sbjct: 96 AGPDALATRDKKVAACKSAKARLEDRFKTGKNRWFFTKLRF 136
Score = 54.4 bits (125), Expect = 1e-07
Identities = 25/71 (35%), Positives = 43/71 (60%)
Frame = +3
Query: 93 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSXQAIRACLRRWYRQVPPESAQEDGKE 272
M K +KPGK V++L GR+AGRKA++V+ ++EGT + CL + P + ++D +
Sbjct: 1 MVKFLKPGKAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 273 *NPQEVQDKAF 305
++ + K F
Sbjct: 61 KTAKKSRVKCF 71
>02_02_0470 - 10700092-10700505
Length = 137
Score = 101 bits (241), Expect = 1e-21
Identities = 47/102 (46%), Positives = 69/102 (67%), Gaps = 3/102 (2%)
Frame = +1
Query: 199 KPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS 378
+PYGH VAG+ +YP+KV ++ K K+S++K F+K+VN+ H+MPTRYT+D F+ +
Sbjct: 36 RPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRVKCFLKLVNFTHIMPTRYTLDVDFKDVA 95
Query: 379 AKDLKDPAKR-KKLRF--NTRVRFEERYKSGKNKWFFQKLRF 495
+ A R KK+ + R EER+K+GKN+WFF KLRF
Sbjct: 96 SGGPDALATRDKKVAACKAAKARLEERFKTGKNRWFFTKLRF 137
Score = 56.0 bits (129), Expect = 4e-08
Identities = 26/71 (36%), Positives = 43/71 (60%)
Frame = +3
Query: 93 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSXQAIRACLRRWYRQVPPESAQEDGKE 272
M K +KPGK V++L GRYAGRKA++V+ ++EGT + CL + P + ++D +
Sbjct: 1 MVKFLKPGKAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 273 *NPQEVQDKAF 305
++ + K F
Sbjct: 61 KTAKKSRVKCF 71
>02_04_0433 -
22891261-22891509,22892181-22892301,22892405-22892496,
22892692-22892755,22892855-22892920,22893102-22893193,
22893991-22894050,22894181-22894270,22894484-22894613,
22895066-22895157,22895299-22895373,22895663-22895754,
22896496-22896586,22897541-22897574,22897745-22897791,
22899110-22899209,22899300-22899436,22900837-22901015,
22901146-22901188,22901264-22901297,22901839-22901948,
22902043-22902224,22903062-22903168,22903266-22903480
Length = 833
Score = 34.7 bits (76), Expect = 0.10
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 84 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 188
P+K+ + PG V+++L+GRY G++ + +K G
Sbjct: 68 PTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSG 102
>01_01_0538 -
3938389-3939727,3939828-3940203,3940299-3940516,
3940607-3940769,3940866-3941100,3941186-3941353
Length = 832
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 178 TTKVPPXKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNH 330
T+ VPP PY + G RYP + + KN + R + N NH
Sbjct: 614 TSSVPPSPPYRVTGMYGTPRYPAEKSVLLKKNNVIHRQGVGRSEGDANMNH 664
>09_01_0103 -
1628763-1628879,1641827-1642921,1645126-1645476,
1645567-1645734
Length = 576
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 419 RSFLRLAGSFRSFALNFSKLKSTV*RV 339
RSFL LAG +R F NFSK+ ++ R+
Sbjct: 453 RSFLGLAGYYRRFIENFSKIAKSMTRL 479
>01_01_0249 +
2047793-2048561,2049861-2049896,2050068-2051012,
2051215-2051264
Length = 599
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -1
Query: 346 NVLASSDYS-LQP*RKALSWTSCGFYSFPSSCALSGGTCRYQRRRHARMAC 197
N+ A ++YS L L W GF +C SGG CRY A AC
Sbjct: 194 NLTAGTNYSPLFKKGFVLEWQKNGFGDC-DACNASGGQCRYNNDSAAAFAC 243
>11_05_0008 - 18335815-18336080,18340549-18340923,18342570-18342669
Length = 246
Score = 29.5 bits (63), Expect = 3.8
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Frame = +2
Query: 44 KIXSFLCQRVKGISLQDGQNNEAG*SSAGPKWPVRGSQGY------RSQELRRRYLRTSH 205
K S L RV + + +G A P+ V S GY R LRRR LRT+
Sbjct: 90 KRISTLTDRVAALETPSNEEVVSGDDDAHPEDTVYDSSGYIDALATRQARLRRR-LRTNR 148
Query: 206 TGMPSSLVSTGT 241
TGM + GT
Sbjct: 149 TGMGGTRHQQGT 160
>04_03_0540 +
16929782-16929834,16929937-16930032,16930111-16930185,
16930819-16930893,16930987-16931209,16931303-16931546,
16932111-16932568,16932647-16932928,16933032-16933733
Length = 735
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 408 TFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHF 247
TF + F + E + WH++I YNL++ +YL + D V+F
Sbjct: 298 TFKKAFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 350
>01_06_1350 +
36505926-36505978,36506081-36506176,36506255-36506329,
36506964-36507038,36507132-36507348,36507442-36507685,
36508250-36508707,36508786-36509067,36509171-36509872
Length = 733
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 408 TFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHF 247
TF + F + E + WH++I YNL++ +YL + D V+F
Sbjct: 296 TFKKAFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 348
>10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,
8265508-8265704,8275672-8275824
Length = 1034
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 419 RSFLRLAGSFRSFALNFSKLKSTV*RV 339
RSFL LAG +R F NFSK+ + R+
Sbjct: 954 RSFLGLAGYYRRFIENFSKIDKPMTRL 980
>08_02_0167 -
13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 419 RSFLRLAGSFRSFALNFSKL 360
RSFL LAG +R F NFSK+
Sbjct: 505 RSFLGLAGYYRRFIKNFSKI 524
>08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,
3908317-3908337
Length = 1230
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 419 RSFLRLAGSFRSFALNFSKLKSTV*RV 339
RSFL LAG +R F NFSK+ + R+
Sbjct: 985 RSFLGLAGYYRRFIENFSKIAKPMTRL 1011
>10_02_0059 + 4785858-4786988
Length = 376
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 419 RSFLRLAGSFRSFALNFSKL 360
RSFL LAG +R F NFSK+
Sbjct: 224 RSFLGLAGYYRRFIENFSKI 243
>09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555
Length = 383
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 419 RSFLRLAGSFRSFALNFSKL 360
RSFL LAG +R F NFSK+
Sbjct: 281 RSFLGLAGYYRRFIENFSKI 300
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 419 RSFLRLAGSFRSFALNFSKL 360
RSFL LAG +R F NFSK+
Sbjct: 411 RSFLGLAGYYRRFIENFSKI 430
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 419 RSFLRLAGSFRSFALNFSKL 360
RSFL LAG +R F NFSK+
Sbjct: 1071 RSFLGLAGYYRRFIENFSKI 1090
>04_04_0211 -
23636377-23636532,23636624-23636805,23637853-23637959,
23637997-23638280
Length = 242
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 93 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 188
M + PG V+++L+GR+ G++ + +K G
Sbjct: 94 MRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 125
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 419 RSFLRLAGSFRSFALNFSKL 360
RSFL LAG +R F NFSK+
Sbjct: 794 RSFLGLAGYYRRFIENFSKI 813
>01_01_0235 - 1964981-1964997,1965545-1966325
Length = 265
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 346 NVLASSDYSLQP*RK-ALSWTSCGFYSFPSSCALSGGTCRYQRRRHARMAC 197
N+ A ++YS Q + L W GF +C SGG CRY A AC
Sbjct: 198 NLTAGTNYSPQFKKGFVLEWQKNGFGDC-DACNGSGGQCRYINDSAAAFAC 247
>04_04_1192 + 31611804-31612113,31612235-31614058,31614098-31614842,
31615047-31616835,31617136-31617163,31617343-31617794
Length = 1715
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 229 IDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF----EKFSAKDLK 393
I Y R++ M ++ + K+K F +NY+H R T ++ E S KDLK
Sbjct: 919 IGTYNRELTSNMRILRMERCDKLKDFTLFLNYDHFRVERKTWQWTILPFEEMHSLKDLK 977
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,587,552
Number of Sequences: 37544
Number of extensions: 338173
Number of successful extensions: 848
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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